PROTEIN: HRGMv2_2302_86_4
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Protein File & Metadata
Source:
HRGMv2_2302_86_4.pdb
Genome ID:
Protein ID:
HRGMv2_2302_86_4
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Protein Sequence
MEKHYKKILK DTEERVASRL RAQEMDEKSP CYGGFYDTNR MVQAKYTIIC VEPMITLYCN 60 PDSRYYRNPL LAWRAELGLA YIRSVQHENG LFDYVTCNFL SAPDTAFCIG FFIPLYEYLQ 120 KKQERTGQEE SFLKRIGEIV HDGAYGLLEG GFHTPNHRWA IASSLAKCGV LFGDKKLADS 180 ADSYLIEGID CNADGEFAEK SAGNYNSVNN DAMLMLSEAR GDAQYEQHTI RNLYMMLTYW 240 EPDGSIFTAN STRFDKDRLV YPLSYYIEYL AMGIKYEIPE FLGMCNTIFD IIEEKRIFSP 300 ECLIHLMLHP EYRRFEYVGR YEQPDFTRFY EDSGILRARK GNYSYTVMRE KSNFLYFHNG 360 TSKLEMKVAG SFCEHRAFKA ETMEILPDGT AHLHQTMRGW YYLPFEEKPE TSDWWKMDQS 420 SRRKKLGPDM EIDVYVAPAE CGIDIRVVTN GVQGAPWRVE LAFSGIAYMA SEHVMLPVNG 480 SEVLVIKDRE LEAYNEKDSL LIGPGFGEHR FTEGKEDSET KTPGAATVYF TDYTDFDHTI 540 RIRNRRDLEE KLLEER 556
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8HMP8-F1-model_v4 | 1 | 555 | 16 | 606 | 0.6609 |
0.7195 |
| AF-Q8CZ74-F1-model_v4 | 1 | 555 | 17 | 589 | 0.658 |
0.714 |
| AF-Q8CWU3-F1-model_v4 | 1 | 552 | 319 | 936 | 0.5459 |
0.7269 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7G8UMI7-F1-model_v4 | PL37 | 3 | 546 | 1 | 597 | 0.7323 |
0.7879 |
| AF-C6Y378-F1-model_v4 | PL37 | 1 | 549 | 26 | 628 | 0.7199 |
0.7847 |
| AF-A0A172TXM4-F1-model_v4 | PL37 | 1 | 549 | 25 | 625 | 0.7197 |
0.7831 |
| A0A975CX51 | PL37 | 1 | 550 | 2 | 590 | 0.7186 |
0.7623 |
| AF-A0A7G8UQS2-F1-model_v4 | PL37 | 4 | 546 | 1 | 610 | 0.7143 |
0.7771 |
| A0A413LPX4 | PL37 | 1 | 546 | 1 | 644 | 0.6986 |
0.7749 |
| BCM88302.1 | PL37 | 2 | 550 | 6 | 595 | 0.6968 |
0.7466 |
| AF-A0A6P1THD6-F1-model_v4 | PL37 | 7 | 550 | 1 | 598 | 0.696 |
0.7515 |
| AF-A0A3Q9FIR8-F1-model_v4 | PL37 | 1 | 546 | 37 | 636 | 0.688 |
0.7607 |
| AF-A0A0C5WDZ4-F1-model_v4 | PL37 | 1 | 546 | 36 | 635 | 0.6872 |
0.7596 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7G8UMI7 | PL37 | 3 | 546 | 1 | 597 | 0.7323 |
0.7879 |
| C6Y378 | PL37 | 1 | 549 | 26 | 628 | 0.7199 |
0.7847 |
| A0A975CX51 | PL37 | 1 | 550 | 2 | 590 | 0.7186 |
0.7623 |
| A0A7G8UQS2 | PL37 | 4 | 546 | 1 | 610 | 0.7143 |
0.7771 |
| A0A7I8DQ11 | PL33_2 | 1 | 550 | 6 | 575 | 0.7008 |
0.7356 |
| A0A413LPX4 | PL37 | 1 | 546 | 1 | 644 | 0.6986 |
0.7749 |
| A0A6B2R9J7 | PL33_2 | 2 | 549 | 1 | 557 | 0.6972 |
0.7243 |
| BCM88302.1 | PL37 | 2 | 550 | 6 | 595 | 0.6968 |
0.7466 |
| A0A6P1THD6 | PL37 | 7 | 550 | 1 | 598 | 0.696 |
0.7515 |
| A0A415S2E7 | PL37 | 1 | 545 | 28 | 633 | 0.6947 |
0.7668 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1lxk-assembly1.cif.gz_A | 1 | 552 | 20 | 637 | 0.6308 |
0.7274 |
| 1n7o-assembly1.cif.gz_A | 1 | 552 | 21 | 638 | 0.6299 |
0.7271 |
| 1x1j-assembly1.cif.gz_A | 1 | 552 | 21 | 630 | 0.6294 |
0.7384 |
| 1ojo-assembly1.cif.gz_A | 1 | 552 | 21 | 638 | 0.6287 |
0.7263 |
| 1n7n-assembly1.cif.gz_A | 1 | 552 | 21 | 638 | 0.6285 |
0.7258 |
| 2brp-assembly1.cif.gz_A | 1 | 552 | 21 | 639 | 0.6283 |
0.7257 |
| 1n7p-assembly1.cif.gz_A | 1 | 552 | 21 | 639 | 0.6275 |
0.7247 |
| 1j0n-assembly1.cif.gz_A | 1 | 552 | 17 | 630 | 0.6262 |
0.7348 |
| 1n7r-assembly1.cif.gz_A | 1 | 552 | 21 | 639 | 0.6256 |
0.7223 |
| 2e24-assembly1.cif.gz_A | 1 | 552 | 17 | 630 | 0.6254 |
0.7339 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KMH5-F1-model_v4 | 1 | 546 | 34 | 638 | 0.6894 |
0.763 |
| AF-Q59288-F1-model_v4 | 8 | 552 | 38 | 592 | 0.5863 |
0.6767 |
| AF-Q9AQS0-F1-model_v4 | 1 | 552 | 46 | 655 | 0.5813 |
0.7372 |
| AF-Q54873-F1-model_v4 | 1 | 552 | 307 | 925 | 0.5472 |
0.7267 |