PROTEIN: HRGMv2_2302_2_17
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Protein File & Metadata
Source:
HRGMv2_2302_2_17.pdb
Genome ID:
Protein ID:
HRGMv2_2302_2_17
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Protein Sequence
MDYQQLHNPI WSRSDNLRDP SVFKTPDGYY LFYSRYSNND WTKPENWSVA CTFTKDFIHF 60 EKDRDISAKG FASPGDVISW NGKYLLPYQS YPDSPTLLCY STSADLKSWT EPVFFLQEAA 120 SLPWNQANRV IDPTFVADGE RLHCFFVGTD RIHYQSPINL VGHAYTDDPQ LQKWILTTVD 180 SPLIGACEEA PDGAENVTVF HNGKEWIMIY SEGLINQHLA SIVSSDLIHW GNRRKIDIPG 240 QSWLAVRYGA PFVWKEDENW MMILMGEAEN GHTTFGLLSS ADGYHWNMPG QQSL 294
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WLW7-F1-model_v4 | 4 | 282 | 4 | 299 | 0.7973 |
0.8622 |
| AF-A0A132Z9M4-F1-model_v4 | 2 | 291 | 2 | 317 | 0.7642 |
0.8236 |
| AF-A0A0H3GMN3-F1-model_v4 | 2 | 291 | 1 | 313 | 0.7587 |
0.815 |
| AF-A0A175VX88-F1-model_v4 | 1 | 292 | 18 | 318 | 0.7502 |
0.8068 |
| AF-B4FDS0-F1-model_v4 | 6 | 292 | 32 | 360 | 0.7411 |
0.8508 |
| AF-A0A1C1CEU0-F1-model_v4 | 7 | 292 | 1 | 323 | 0.741 |
0.8166 |
| AF-A0A0D2GZK6-F1-model_v4 | 6 | 292 | 1 | 326 | 0.7391 |
0.8154 |
| AF-A0A175W3S2-F1-model_v4 | 1 | 292 | 20 | 328 | 0.7362 |
0.8089 |
| AF-C0NYY8-F1-model_v4 | 2 | 292 | 37 | 328 | 0.7357 |
0.8068 |
| AF-Q6ZA95-F1-model_v4 | 1 | 291 | 29 | 378 | 0.7322 |
0.8467 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6I6UUV6-F1-model_v4 | GH43_33 | 1 | 292 | 5 | 315 | 0.7895 |
0.844 |
| AF-A0A5Q2NVB4-F1-model_v4 | GH117 | 5 | 282 | 19 | 318 | 0.7842 |
0.8764 |
| A0A0K3A008 | GH0 | 6 | 293 | 7 | 307 | 0.784 |
0.8344 |
| AF-A0A5B8C4M0-F1-model_v4 | GH43_32 | 2 | 292 | 2 | 311 | 0.7835 |
0.8403 |
| QWD13015.1 | GH0 | 6 | 286 | 9 | 312 | 0.7831 |
0.8623 |
| AF-A0A7Z2ZJJ1-F1-model_v4 | GH137 | 4 | 292 | 10 | 333 | 0.7801 |
0.8575 |
| AF-A0A2I8A7J6-F1-model_v4 | GH43_32 | 2 | 294 | 1 | 322 | 0.7779 |
0.8368 |
| AF-A0A291GTY9-F1-model_v4 | GH43_32 | 7 | 294 | 5 | 305 | 0.7771 |
0.826 |
| AF-A0A7G5C0X1-F1-model_v4 | GH137 | 4 | 293 | 10 | 334 | 0.777 |
0.8539 |
| AF-A0A5P8W8R3-F1-model_v4 | GH43_32 | 2 | 294 | 1 | 327 | 0.7763 |
0.8426 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6P1THQ1 | GH43_33 | 2 | 291 | 1 | 303 | 0.7906 |
0.8361 |
| A0A4Q5NSE9 | GH159 | 2 | 293 | 1 | 309 | 0.777 |
0.8256 |
| F8DDG6 | GH159 | 1 | 292 | 14 | 320 | 0.7769 |
0.8324 |
| A0A5Q2TMY4 | GH43_34 | 2 | 294 | 1 | 294 | 0.7763 |
0.7996 |
| A0A6S6R3K5 | GH159 | 2 | 293 | 3 | 309 | 0.7744 |
0.824 |
| A0A2S1QWH3 | GH130 | 6 | 284 | 8 | 294 | 0.7738 |
0.8343 |
| BDE05525.1 | GH130 | 6 | 285 | 12 | 301 | 0.7735 |
0.8386 |
| A0A4P8TGJ2 | GH43_32 | 7 | 294 | 4 | 310 | 0.7721 |
0.8279 |
| D3ABB2 | GH43_17 | 9 | 292 | 1 | 293 | 0.772 |
0.8166 |
| F2NQC1 | GH32 | 9 | 291 | 1 | 311 | 0.7713 |
0.8422 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4qqs-assembly1.cif.gz_A | 5 | 292 | 1 | 307 | 0.7915 |
0.848 |
| 7zei-assembly4.cif.gz_D | 4 | 293 | 1 | 303 | 0.7728 |
0.8202 |
| 3qee-assembly2.cif.gz_B | 5 | 292 | 1 | 293 | 0.7658 |
0.8098 |
| 3qef-assembly1.cif.gz_A | 7 | 292 | 1 | 291 | 0.7642 |
0.8096 |
| 3kst-assembly2.cif.gz_B | 10 | 291 | 4 | 285 | 0.7601 |
0.8057 |
| 5m8b-assembly1.cif.gz_B | 1 | 291 | 1 | 322 | 0.7583 |
0.8216 |
| 5m8e-assembly1.cif.gz_B | 2 | 291 | 1 | 320 | 0.7581 |
0.8214 |
| 3k1u-assembly1.cif.gz_A | 6 | 291 | 1 | 311 | 0.758 |
0.8218 |
| 5muj-assembly1.cif.gz_A | 3 | 291 | 16 | 342 | 0.7532 |
0.8505 |
| 4nov-assembly1.cif.gz_A | 2 | 292 | 2 | 302 | 0.7525 |
0.7986 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WLW6-F1-model_v4 | 4 | 282 | 4 | 299 | 0.7985 |
0.8633 |
| AF-P9WLW7-F1-model_v4 | 4 | 282 | 4 | 299 | 0.7973 |
0.8622 |
| AF-B0K2C2-F1-model_v4 | 3 | 286 | 5 | 295 | 0.7677 |
0.8152 |
| AF-B3EYM8-F1-model_v4 | 1 | 291 | 12 | 315 | 0.7387 |
0.7905 |
| AF-P48791-F1-model_v4 | 4 | 291 | 1 | 319 | 0.7382 |
0.8047 |
| AF-Q8A8Y4-F1-model_v4 | 1 | 286 | 5 | 313 | 0.7378 |
0.8088 |
| AF-Q93HT9-F1-model_v4 | 1 | 287 | 10 | 313 | 0.7352 |
0.7942 |
| AF-P49943-F1-model_v4 | 4 | 291 | 2 | 324 | 0.7325 |
0.8048 |
| AF-B8NDL1-F1-model_v4 | 6 | 287 | 22 | 319 | 0.7276 |
0.8036 |
| AF-Q2U8C6-F1-model_v4 | 6 | 287 | 22 | 319 | 0.7275 |
0.8035 |