PROTEIN: HRGMv2_2302_29_41
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Protein File & Metadata
Source:
HRGMv2_2302_29_41.pdb
Genome ID:
Protein ID:
HRGMv2_2302_29_41
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Protein Sequence
MKKRIIAALL AGILAMGTVA CTGSRNTGNS DSTSGTEQAA DAGEENGFYV SEAEGGKTTD 60 QFTIWCGWTS SAPDDTMVQK ITREQVGIDY KVEFIQDNDF MSTLNMKLSS NAQMADIIVV 120 PYNIAAENAL VTADRVMNLT DIYSSDKLKN LPGLNDKLKE FMKDEEGNMW YVPGWYAAEY 180 DDPWPGWTLD AWWVRMDLLK QVGAKKEDLK TIEGLEQVMR NMAKLKDENG NTIIPLSFVQ 240 SDNAFQERII LATFGVDTSG GGSNMPAVMK EGDEFVFLYD NPKYKAAYQW MNQMYREGLI 300 DMEVSTQSKE RFIEKIESGQ VGIFTTDLWI TNLNETWRNY TDYGQSVTLN YEPVADPSVA 360 GVEKGHTSYV NPNPGYMLFI NKDTKNLNAV LNFLEWVNEP DPYRGHELSE GPRGVFWDLV 420 DEETGTWKYI DEEYDSIRNS GDVAQKATAT PELWQLTPYS KEWYPWWNVY VDPQEKKMSD 480 MVNTWCDYIG EEIGNHRVVT DADQVKAAAD SSIAQNITSL NAVVNEYTAK MIMAESDEKF 540 EQAYQEFLKQ LNSRGKWDKM KEEWNTLYKE QYGN 574
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 7 | 574 | 10 | 502 | 0.6978 |
0.7751 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 52 | 574 | 37 | 503 | 0.6358 |
0.745 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 56 | 574 | 25 | 745 | 0.4248 |
0.5321 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 52 | 574 | 37 | 503 | 0.6358 |
0.745 |
| A0A7U1BNH7 | GH10 | 56 | 574 | 25 | 745 | 0.4248 |
0.5321 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g5y-assembly1.cif.gz_A | 57 | 574 | 1 | 488 | 0.72 |
0.8001 |
| 3omb-assembly1.cif.gz_A | 54 | 574 | 1 | 503 | 0.7021 |
0.7668 |
| 6fth-assembly1.cif.gz_A | 56 | 574 | 1 | 496 | 0.7003 |
0.7697 |
| 5xs8-assembly1.cif.gz_A | 60 | 572 | 1 | 474 | 0.6619 |
0.7431 |
| 5g62-assembly2.cif.gz_B | 61 | 574 | 1 | 486 | 0.6521 |
0.7283 |
| 4tqu-assembly1.cif.gz_Q | 38 | 574 | 2 | 488 | 0.6505 |
0.7269 |
| 5h6u-assembly1.cif.gz_A | 38 | 574 | 1 | 485 | 0.6477 |
0.7238 |
| 6jhx-assembly2.cif.gz_B | 38 | 574 | 2 | 483 | 0.6453 |
0.722 |
| 3vlw-assembly2.cif.gz_B | 38 | 574 | 1 | 487 | 0.6431 |
0.7179 |
| 5suo-assembly1.cif.gz_A | 60 | 574 | 1 | 449 | 0.6281 |
0.7245 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q795R2-F1-model_v4 | 50 | 572 | 31 | 498 | 0.7066 |
0.8176 |
| AF-A0A0H2URD6-F1-model_v4 | 47 | 574 | 34 | 532 | 0.69 |
0.7824 |
| AF-P37966-F1-model_v4 | 51 | 574 | 28 | 502 | 0.6833 |
0.7849 |
| AF-Q8FVS7-F1-model_v4 | 56 | 567 | 21 | 411 | 0.5694 |
0.7061 |
| AF-Q578M8-F1-model_v4 | 56 | 567 | 20 | 411 | 0.5678 |
0.7031 |
| AF-Q2YKZ9-F1-model_v4 | 56 | 567 | 21 | 411 | 0.5665 |
0.7028 |
| AF-Q7LYW7-F1-model_v4 | 43 | 566 | 33 | 450 | 0.5492 |
0.6721 |
| AF-O34335-F1-model_v4 | 61 | 571 | 29 | 424 | 0.5309 |
0.6617 |