PROTEIN: HRGMv2_2290_17_3
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Protein File & Metadata
Source:
HRGMv2_2290_17_3.pdb
Genome ID:
Protein ID:
HRGMv2_2290_17_3
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Protein Sequence
MKKNSLQKVL AVAMVGAMAA GTMTACGNSG SSDASSSAAA SSSAAESSAE ASTTAGSDAA 60 AADDGATGID SWEAFADNVT LKVPVYDRGA EGVPDVTNNY WTQWVQENFG DKYNVTVEYV 120 PITRSDVMTD YALLASSNSL PTILMEYDYP KTSQWANDGY LTTFDMDEFA KVAPTYYARM 180 VEQNQLDYSV MDGDTYFVLA ERPYSATSYG WQTFVRMDWL EQVGYDHVPM TREEYLDAMQ 240 KIMDAGICDH PGGGSKLAGS GIDQNQGWRT FPLDEKEWAM YGDYNIVSMS WEPNKLLLKA 300 ANEEYNLGIT NPEYYVTDSE TAKANFVNGN QYSYGMYINQ SADVLKSLWE NQPDAKLAIV 360 PADANYANAP AWRSDNPFGM IVGFSSSATE DEIKAAWMYM EWLNQPENLF TLQWGVEGEN 420 FNYNDEGLPV SVSDYDGEYK QGYSYSADYY CIVTSARNAG TIEQIIANSF PQDFDQSAEL 480 TQEVIDYYYK RVELAKEGYA TVDCMFSTVI DAEAEYRDTL VSKYVEYRDK LTMCDPSEFD 540 SLYDQYAQEY LDAGYQEVID ERAQAYEDGK TTKLPANN 578
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DNU8-F1-model_v4 | 74 | 562 | 36 | 440 | 0.6222 |
0.7758 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 71 | 571 | 40 | 506 | 0.6851 |
0.8028 |
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 4 | 562 | 198 | 797 | 0.4826 |
0.584 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 75 | 569 | 26 | 744 | 0.4756 |
0.6231 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 71 | 571 | 40 | 506 | 0.6851 |
0.8028 |
| A0A1Q2TKJ3 | GH49 | 4 | 562 | 198 | 797 | 0.4826 |
0.584 |
| A0A7U1BNH7 | GH10 | 75 | 569 | 26 | 744 | 0.4756 |
0.6231 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fth-assembly1.cif.gz_A | 75 | 576 | 1 | 496 | 0.7097 |
0.7785 |
| 3omb-assembly1.cif.gz_A | 74 | 574 | 3 | 503 | 0.7073 |
0.7743 |
| 5xs8-assembly1.cif.gz_A | 78 | 572 | 1 | 474 | 0.7038 |
0.7891 |
| 5g5y-assembly1.cif.gz_A | 73 | 576 | 1 | 494 | 0.6916 |
0.7625 |
| 4tqu-assembly1.cif.gz_Q | 69 | 576 | 2 | 492 | 0.6881 |
0.7618 |
| 5h6u-assembly1.cif.gz_A | 69 | 576 | 1 | 487 | 0.688 |
0.7636 |
| 6jhx-assembly2.cif.gz_B | 69 | 573 | 2 | 483 | 0.6878 |
0.7676 |
| 3vlw-assembly2.cif.gz_B | 69 | 576 | 1 | 489 | 0.6869 |
0.7612 |
| 5g62-assembly2.cif.gz_B | 78 | 578 | 1 | 491 | 0.6741 |
0.7466 |
| 5suo-assembly1.cif.gz_A | 78 | 576 | 1 | 451 | 0.668 |
0.7659 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37966-F1-model_v4 | 73 | 573 | 29 | 502 | 0.7263 |
0.8344 |
| AF-Q795R2-F1-model_v4 | 69 | 571 | 35 | 498 | 0.6982 |
0.8157 |
| AF-Q9V297-F1-model_v4 | 32 | 561 | 39 | 453 | 0.5486 |
0.6792 |