PROTEIN: HRGMv2_2277_28_25
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Protein File & Metadata
Source:
HRGMv2_2277_28_25.pdb
Genome ID:
Protein ID:
HRGMv2_2277_28_25
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Protein Sequence
MKNRSNEESS MDKSSRNKGN RAQMFLLAAV LCLWGTGMRA VYAAQDTVQA AAQDTVQAAA 60 LDNTENTADV IHIEYSNLRE LLKQGNLSLK ESIEDYEDNV NAYQEIWDTL KREQDNMEDK 120 AEDMDDEDSQ TAGVYASNAA MLKSLASRIY SQLDTMTSEK STRSLEKSAD TFTMTAQTLM 180 NSYNQMVQNV EYQEKRAESL QAAWEAMARK QAAGSATQAQ LKEAQKSLDT ARNSLESLNL 240 QARELRQQLL TMLGLEASSQ AVIGTIPEPD MAAIEAVDYE SDKVRAMGND KSVQNARHTS 300 ASSTTEINIR FKLVDEAEGT KEAAFLASYQ ELQARKTAYE AALTAFRSAQ LSYEGLQRKQ 360 QAGLLTNTEY LEGQASYLEK KAAKETASMN LVAAYESYCW DVKGIS 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HYK0-F1-model_v4 | 63 | 405 | 12 | 425 | 0.5201 |
0.6523 |
| AF-Q9HVJ4-F1-model_v4 | 49 | 405 | 27 | 482 | 0.5153 |
0.6458 |
| AF-O26022-F1-model_v4 | 22 | 405 | 7 | 502 | 0.5129 |
0.6115 |
| AF-A0A0H3GY22-F1-model_v4 | 72 | 405 | 67 | 478 | 0.5068 |
0.6691 |
| AF-A0A0H3GW05-F1-model_v4 | 72 | 405 | 64 | 473 | 0.5022 |
0.6605 |
| AF-Q0P9M1-F1-model_v4 | 67 | 405 | 16 | 417 | 0.5005 |
0.618 |
| AF-Q7CQ86-F1-model_v4 | 72 | 405 | 64 | 475 | 0.4989 |
0.6557 |
| AF-Q8ZLZ4-F1-model_v4 | 63 | 405 | 15 | 428 | 0.4985 |
0.6466 |
| AF-A0A077ZKG5-F1-model_v4 | 64 | 405 | 16 | 431 | 0.4961 |
0.6479 |
| AF-P32714-F1-model_v4 | 72 | 405 | 66 | 478 | 0.4959 |
0.6581 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7L8SMG3-F1-model_v4 | GT2 | 72 | 405 | 720 | 1129 | 0.3536 |
0.6165 |
| AF-A0A250DK50-F1-model_v4 | GT2 | 72 | 405 | 723 | 1132 | 0.3531 |
0.6164 |
| AF-T1XH98-F1-model_v4 | GT2 | 72 | 405 | 721 | 1130 | 0.3523 |
0.6149 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4k34-assembly1.cif.gz_A | 72 | 405 | 12 | 378 | 0.5595 |
0.667 |
| 4mt4-assembly1.cif.gz_C | 72 | 405 | 43 | 449 | 0.4792 |
0.6264 |
| 5azs-assembly1.cif.gz_A | 73 | 403 | 26 | 430 | 0.4758 |
0.6027 |
| 7akz-assembly1.cif.gz_A | 72 | 405 | 46 | 449 | 0.4739 |
0.6091 |
| 5azs-assembly1.cif.gz_B | 73 | 403 | 31 | 435 | 0.4718 |
0.5993 |
| 5azs-assembly1.cif.gz_C | 73 | 405 | 30 | 439 | 0.4699 |
0.601 |
| 4k7r-assembly1.cif.gz_A | 73 | 405 | 30 | 429 | 0.4668 |
0.5885 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P13509-F1-model_v4 | 68 | 405 | 37 | 418 | 0.5245 |
0.6457 |
| AF-P37974-F1-model_v4 | 59 | 405 | 21 | 412 | 0.5202 |
0.626 |
| AF-Q9K2Y1-F1-model_v4 | 66 | 405 | 16 | 421 | 0.5187 |
0.6475 |
| AF-Q44584-F1-model_v4 | 14 | 405 | 8 | 431 | 0.5154 |
0.568 |
| AF-P23598-F1-model_v4 | 64 | 405 | 13 | 430 | 0.5128 |
0.6505 |
| AF-Q8FFV6-F1-model_v4 | 72 | 405 | 64 | 475 | 0.5004 |
0.6579 |
| AF-Q83KF5-F1-model_v4 | 72 | 405 | 64 | 475 | 0.4993 |
0.6559 |
| AF-Q8G0Y6-F1-model_v4 | 62 | 405 | 21 | 422 | 0.499 |
0.6265 |
| AF-Q8X659-F1-model_v4 | 72 | 405 | 64 | 475 | 0.4987 |
0.6556 |
| AF-P32714-F1-model_v4 | 72 | 405 | 66 | 478 | 0.4959 |
0.6581 |