PROTEIN: HRGMv2_2268_98_17
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Protein File & Metadata
Source:
HRGMv2_2268_98_17.pdb
Genome ID:
Protein ID:
HRGMv2_2268_98_17
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Protein Sequence
MKKLAVFFPG IGYHCDKPLL YYSRELACEY GYTQCRNVTY RFGGGNIKGN AEKMQEAFED 60 LYRQAEILLA DIDWKEYEDI LFISKSIGTV IASAYAQKHG VDCRQILYTP LEQTYDFAPQ 120 NAIAFLGTKD SWSNIDKVKQ LSREQEVPIS LYEDANHSLE MADSMKNIEI LQEVMEMTRK 180 YIGSPA 186
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A2R8RQ35-F1-model_v4 | 1 | 186 | 29 | 224 | 0.723 |
0.8132 |
| AF-I1KPJ2-F1-model_v4 | 1 | 186 | 23 | 223 | 0.7079 |
0.802 |
| AF-Q9FJ29-F1-model_v4 | 1 | 186 | 18 | 223 | 0.7072 |
0.7991 |
| AF-Q3TUU5-F1-model_v4 | 1 | 186 | 28 | 223 | 0.7043 |
0.7967 |
| AF-Q5JUR7-F1-model_v4 | 1 | 186 | 28 | 223 | 0.7034 |
0.7982 |
| AF-D3ZL12-F1-model_v4 | 1 | 186 | 28 | 223 | 0.7031 |
0.7979 |
| AF-B4FGW5-F1-model_v4 | 1 | 186 | 26 | 227 | 0.6937 |
0.7952 |
| AF-Q0DJY2-F1-model_v4 | 1 | 186 | 31 | 234 | 0.6933 |
0.7988 |
| AF-Q94JY3-F1-model_v4 | 1 | 186 | 38 | 238 | 0.6903 |
0.8017 |
| AF-Q5F9G1-F1-model_v4 | 1 | 186 | 27 | 213 | 0.6868 |
0.7599 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S0V3T6 | CBM2 , GH5_1 | 1 | 186 | 1 | 175 | 0.7967 |
0.848 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2qjw-assembly2.cif.gz_C | 1 | 186 | 1 | 173 | 0.7964 |
0.8515 |
| 2i3d-assembly1.cif.gz_A | 1 | 186 | 23 | 212 | 0.7117 |
0.7907 |
| 3trd-assembly1.cif.gz_A | 1 | 183 | 30 | 208 | 0.6813 |
0.7731 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3ZC52-F1-model_v4 | 1 | 186 | 28 | 219 | 0.7084 |
0.7995 |
| AF-Q3TUU5-F1-model_v4 | 1 | 186 | 28 | 223 | 0.7043 |
0.7967 |
| AF-Q5JUR7-F1-model_v4 | 1 | 186 | 28 | 223 | 0.7034 |
0.7982 |
| AF-Q9ZD73-F1-model_v4 | 1 | 186 | 24 | 218 | 0.6729 |
0.7769 |