PROTEIN: HRGMv2_2234_10_37
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Protein File & Metadata
Source:
HRGMv2_2234_10_37.pdb
Genome ID:
Protein ID:
HRGMv2_2234_10_37
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Protein Sequence
MKKKVISALL ATTMVATMLV GCGSKGTADA PAADDAQTEE PAADDAADTE EPAADDTADA 60 EPAADEGKVL NIQAWNEEFK SRLIAHYPGY EEVDGTTGKI GDVTVKWTIT PSKDNAYQNN 120 LDEMLLKQAD AAADDKVDLF LIEADYALKY VNSEYTMNVA DLGVTEDDLK DQYQYTKDIV 180 TDDSGVLKGV SWQGCPGVLI YNREAAKEVL GSDDPADVQQ SVKDWDTYLA TAEKMKAAGY 240 KMNSSVVDTY RVFSNNVTSK WVEDGKINID PNIEKWVEMS KKMVDAGECT TAELWSDDWS 300 KGFYPEGKTF CYFGPAWFVD FSMAADTEGS IANQGGWGAV EGPQGFYWGG TWICAATGTD 360 NASLVGDIIK KMTCDVDIMT DIVKDDNDFV NNKPAMEAMA ADTSYQSKVL GGQNPLAMFC 420 AGAGNIDLSN TSPYDQGCNE EFQTAIRNYC DGNLTYDEAV ESFKKAVIVK YPELSE 476
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 12 | 476 | 271 | 866 | 0.5383 |
0.7138 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 12 | 476 | 271 | 866 | 0.5383 |
0.7138 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 64 | 475 | 1 | 393 | 0.7845 |
0.8731 |
| 8bfy-assembly1.cif.gz_A | 68 | 473 | 2 | 393 | 0.7491 |
0.8393 |
| 7vfq-assembly1.cif.gz_A | 62 | 476 | 1 | 394 | 0.7297 |
0.8146 |
| 7vfq-assembly2.cif.gz_B | 62 | 476 | 1 | 396 | 0.7296 |
0.8124 |
| 2z8d-assembly2.cif.gz_B | 63 | 476 | 2 | 398 | 0.729 |
0.8132 |
| 7vfr-assembly1.cif.gz_A | 62 | 476 | 1 | 397 | 0.728 |
0.81 |
| 2z8d-assembly1.cif.gz_A | 63 | 476 | 1 | 400 | 0.7279 |
0.8088 |
| 7vfq-assembly4.cif.gz_D | 62 | 476 | 1 | 397 | 0.7278 |
0.8096 |
| 7c0z-assembly1.cif.gz_A | 66 | 474 | 13 | 393 | 0.727 |
0.834 |
| 7c19-assembly2.cif.gz_B | 66 | 476 | 14 | 396 | 0.7268 |
0.8329 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4GP35-F1-model_v4 | 20 | 476 | 19 | 459 | 0.6518 |
0.708 |
| AF-Q9V297-F1-model_v4 | 33 | 476 | 38 | 453 | 0.6346 |
0.7221 |