PROTEIN: HRGMv2_2225_17_14
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Protein File & Metadata
Source:
HRGMv2_2225_17_14.pdb
Genome ID:
Protein ID:
HRGMv2_2225_17_14
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Protein Sequence
MKSKKLVSLL CVAAMTAGIL TGCGGDAGST NASGSAGSAA NASSGSAGSS DSSSSSDTMT 60 LEIFDVAANY QGMQTGWFAK VVKDRFNIEL NIIAPQVAGD AIYQTRASSG NLGDILILEK 120 NQFQDCVATG LIKDISGEIW NSENLSNYKE QIDTLNNSLE GNDGKTYGIP TEMMNTSPTS 180 YSQDVIYSSP LLRWDLYSEL GCPDIADLDG LLDVLEDMMQ NHPTNASGDP CYPFSLWADW 240 DGGDGMLGIA NVVQLTTWYG EKIKGSVILK PDGTFIPLTD KNGTYYKILK FLNTAERRGL 300 VDPDSATQDW NSACAKMSAG QVYLMWYSWQ VGFWNSTDRL QDGSAFIFTP VADQTYYTDA 360 DSYYGSGRVF AVGSQVDDAK YQRIMEFLDW YASPEGLMFQ HDGIEGFNYE KGEDGRLYQI 420 NSNALMDNLP VPEEWGGAGY QDGNNAINQW IVSANSVNPL TNETYAVNYW STYKEATMTD 480 MKKAWQEKFG AEEPADYMKK NNKLVISPNV SVALPSDSAD ISVIRNQCNE TVCDYSWRMI 540 YAKDDAEFDS MWDEMTTQLT GFGFDDLMKF DTEKHTIELN AKNAVK 586
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DRJ6-F1-model_v4 | 7 | 584 | 31 | 514 | 0.6347 |
0.7298 |
| AF-O53485-F1-model_v4 | 20 | 571 | 22 | 439 | 0.5609 |
0.6839 |
| AF-Q7AQ51-F1-model_v4 | 19 | 574 | 24 | 445 | 0.549 |
0.6672 |
| AF-K0F8J3-F1-model_v4 | 20 | 571 | 21 | 434 | 0.5419 |
0.6635 |
| AF-P59214-F1-model_v4 | 54 | 574 | 39 | 423 | 0.5392 |
0.6918 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 54 | 581 | 45 | 506 | 0.6508 |
0.7741 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 54 | 581 | 45 | 506 | 0.6508 |
0.7741 |
| K8EJG7 | CBM50 , CE4 | 54 | 571 | 32 | 415 | 0.5439 |
0.695 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 56 | 578 | 1 | 474 | 0.7084 |
0.7996 |
| 5g62-assembly2.cif.gz_B | 54 | 586 | 1 | 491 | 0.6979 |
0.7774 |
| 5h6u-assembly1.cif.gz_A | 52 | 584 | 4 | 487 | 0.6867 |
0.7722 |
| 6jhx-assembly2.cif.gz_B | 48 | 581 | 2 | 483 | 0.6867 |
0.7716 |
| 4tqu-assembly1.cif.gz_Q | 47 | 584 | 1 | 492 | 0.6859 |
0.7639 |
| 3vlw-assembly2.cif.gz_B | 48 | 584 | 2 | 489 | 0.6823 |
0.7635 |
| 6fth-assembly1.cif.gz_A | 52 | 581 | 1 | 496 | 0.649 |
0.7219 |
| 5suo-assembly1.cif.gz_A | 54 | 584 | 1 | 451 | 0.6476 |
0.748 |
| 3omb-assembly1.cif.gz_A | 51 | 581 | 3 | 503 | 0.6417 |
0.713 |
| 5iai-assembly1.cif.gz_A | 52 | 570 | 1 | 399 | 0.621 |
0.7516 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 50 | 586 | 43 | 538 | 0.6004 |
0.6945 |
| AF-D4GP35-F1-model_v4 | 21 | 570 | 17 | 459 | 0.5911 |
0.6987 |
| AF-O58758-F1-model_v4 | 49 | 570 | 39 | 420 | 0.5729 |
0.7368 |
| AF-Q795R2-F1-model_v4 | 51 | 581 | 38 | 498 | 0.5561 |
0.6613 |
| AF-A0QXD9-F1-model_v4 | 5 | 571 | 35 | 477 | 0.5559 |
0.6688 |
| AF-O34335-F1-model_v4 | 55 | 571 | 27 | 418 | 0.553 |
0.7007 |
| AF-P58300-F1-model_v4 | 54 | 570 | 56 | 433 | 0.5516 |
0.7272 |
| AF-Q9V297-F1-model_v4 | 47 | 571 | 66 | 453 | 0.5474 |
0.7189 |
| AF-O07009-F1-model_v4 | 53 | 570 | 35 | 418 | 0.5436 |
0.6976 |
| AF-P59213-F1-model_v4 | 55 | 574 | 39 | 423 | 0.5414 |
0.6954 |