PROTEIN: HRGMv2_2210_1_1183
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Protein File & Metadata
Source:
HRGMv2_2210_1_1183.pdb
Genome ID:
Protein ID:
HRGMv2_2210_1_1183
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Detailed structural information will appear here after analysis...
Protein Sequence
MQQDSGKKLL QWNIIVSMLS QVLSLVINLI SKRVICLYLN VEYLGLQSLY SNFCDVLSFA 60 YFGAGTAMLF SFYGPLARGD KERLAAIYRY YDGIYKKMTW VVLGIGTVST IFAVFSVNAS 120 ISDVEVTVTY LTFMLSVVLY NRQMVRNYFI QADQRRYFVA AVTGGVDASA LIVEILLLKY 180 FRSYEAFVIC ILVKNIFING IFGKYLKARY GFLFEPGREL EKKEADAIKN NVADMVMYRF 240 GKVLISNTDN IFISRFINTA MVGIYSNYQF IIAGITSLIG AFYEAITARV GQLLSVSERE 300 NQYQGFQFYS FINSWMTGAT IVCFYYLVQD FIRIWMGTVE LLSREVIIVI IVNYYLEICR 360 SATKMYRESA GLFKNIKRMI LIKGGLNIVL SFVLGKIWGL WGILFATTIA SAVTLFWYEP 420 LIVFRYFRKS FLNEIYYQFI TLLLLAVSLF VTGAAVRALP EGGVLHFLLK AAVCGVVCNL 480 CYLAFYLIFN RRMKKNMKA 499
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 2 | 491 | 1 | 465 | 0.8493 |
0.9034 |
| AF-Q58467-F1-model_v4 | 2 | 491 | 1 | 497 | 0.8321 |
0.8722 |
| AF-H9L497-F1-model_v4 | 2 | 491 | 1 | 473 | 0.8294 |
0.8851 |
| AF-A0A0H3GSJ3-F1-model_v4 | 2 | 491 | 1 | 468 | 0.8243 |
0.8775 |
| AF-P77377-F1-model_v4 | 2 | 491 | 1 | 473 | 0.8234 |
0.8787 |
| AF-Q8DPI1-F1-model_v4 | 2 | 491 | 1 | 479 | 0.8223 |
0.8688 |
| AF-Q2G0R7-F1-model_v4 | 1 | 493 | 1 | 491 | 0.814 |
0.8516 |
| AF-P37169-F1-model_v4 | 1 | 491 | 7 | 518 | 0.8106 |
0.8615 |
| AF-P37746-F1-model_v4 | 2 | 433 | 1 | 415 | 0.8091 |
0.8968 |
| AF-P26400-F1-model_v4 | 4 | 430 | 5 | 430 | 0.8086 |
0.8894 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 491 | 1 | 498 | 0.8329 |
0.8762 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 491 | 34 | 536 | 0.7963 |
0.8604 |
| QNU38870.1 | GT4 | 6 | 492 | 1 | 466 | 0.7391 |
0.8751 |
| QJC17489.1 | GT2 | 1 | 491 | 220 | 832 | 0.7071 |
0.9095 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 3 | 499 | 1 | 524 | 0.6735 |
0.8763 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 499 | 1 | 850 | 0.6723 |
0.8531 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 10 | 499 | 1 | 838 | 0.6696 |
0.8589 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 491 | 3 | 479 | 0.6683 |
0.8938 |
| A0A4V3CWU6 | GT4 | 10 | 499 | 1 | 831 | 0.6635 |
0.8527 |
| AF-D1BIF1-F1-model_v4 | GT4 | 5 | 499 | 7 | 548 | 0.6565 |
0.8757 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 491 | 1 | 498 | 0.8329 |
0.8762 |
| A0A160T2N7 | GT28 | 1 | 491 | 34 | 536 | 0.7963 |
0.8604 |
| QNU38870.1 | GT4 | 6 | 492 | 1 | 466 | 0.7391 |
0.8751 |
| QJC17489.1 | GT2 | 1 | 491 | 220 | 832 | 0.7071 |
0.9095 |
| A0A3Q9G719 | GT4 | 3 | 499 | 1 | 524 | 0.6735 |
0.8763 |
| A0A3T0RPT8 | GT4 | 1 | 499 | 1 | 850 | 0.6723 |
0.8531 |
| A0A2U8PPB3 | GT4 | 10 | 499 | 1 | 838 | 0.6696 |
0.8589 |
| A0A517Z2I8 | GT2 | 1 | 491 | 3 | 479 | 0.6683 |
0.8938 |
| A0A4V3CWU6 | GT4 | 10 | 499 | 1 | 831 | 0.6635 |
0.8527 |
| D1BIF1 | GT4 | 5 | 499 | 7 | 548 | 0.6565 |
0.8757 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 13 | 490 | 1 | 496 | 0.8067 |
0.8575 |
| 6nc6-assembly2.cif.gz_B | 11 | 494 | 1 | 461 | 0.7898 |
0.8402 |
| 7wag-assembly1.cif.gz_A | 7 | 491 | 1 | 505 | 0.7824 |
0.8411 |
| 6cc4-assembly1.cif.gz_A | 1 | 490 | 58 | 605 | 0.7579 |
0.86 |
| 6fhz-assembly1.cif.gz_A | 10 | 431 | 8 | 436 | 0.756 |
0.8524 |
| 5c6n-assembly1.cif.gz_A | 2 | 429 | 9 | 439 | 0.7082 |
0.7954 |
| 6hfb-assembly3.cif.gz_C | 2 | 428 | 4 | 446 | 0.676 |
0.7674 |
| 5xjj-assembly1.cif.gz_A | 4 | 428 | 5 | 434 | 0.6695 |
0.7614 |
| 6gwh-assembly1.cif.gz_A | 2 | 429 | 2 | 435 | 0.6674 |
0.7488 |
| 3wbn-assembly1.cif.gz_A | 2 | 428 | 3 | 442 | 0.6652 |
0.7551 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 8 | 491 | 1 | 488 | 0.8739 |
0.92 |
| AF-Q48457-F1-model_v4 | 2 | 491 | 1 | 472 | 0.8365 |
0.8888 |
| AF-Q58467-F1-model_v4 | 2 | 491 | 1 | 497 | 0.8321 |
0.8722 |
| AF-P77377-F1-model_v4 | 2 | 491 | 1 | 473 | 0.8234 |
0.8787 |
| AF-O34674-F1-model_v4 | 3 | 490 | 1 | 527 | 0.819 |
0.8875 |
| AF-O34238-F1-model_v4 | 1 | 491 | 1 | 519 | 0.817 |
0.8684 |
| AF-Q99191-F1-model_v4 | 4 | 430 | 6 | 431 | 0.8123 |
0.895 |
| AF-O32273-F1-model_v4 | 1 | 488 | 1 | 471 | 0.8121 |
0.8647 |
| AF-P37169-F1-model_v4 | 1 | 491 | 7 | 518 | 0.8106 |
0.8615 |
| AF-Q05347-F1-model_v4 | 4 | 429 | 1 | 428 | 0.8093 |
0.8975 |