PROTEIN: HRGMv2_2156_6_89
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Protein File & Metadata
Source:
HRGMv2_2156_6_89.pdb
Genome ID:
Protein ID:
HRGMv2_2156_6_89
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Protein Sequence
MEKLIYSKYS NERSPRFSLR TDILEQDGVR SVWKTPAGKE GEEHVASLAK WGEALEKVFK 60 DSPFVCNKCA LEGKSVVLEY VSGETLEERL DSLLKQGEKE EAEKLLTGYL AEIEKIYKGT 120 VFEKTEAFTK VFGETVFFRE MECADVTDID MVCQNLVLTN PPVVLDYEWT FDFPVPGKFV 180 LYRVIHYYIH SNPMREVIDE EEIYRKFGIT PCMCRQFEKM ESSFQKYITD GHIPMRDMFT 240 AMSPGAMWIQ EKYAQLQAEN RELKDEIKKK NYLIREMKNT KIWKMYRKYR KVVERK 296
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0R0FJF0-F1-model_v4 | 1 | 220 | 16 | 233 | 0.5562 |
0.6857 |
| AF-B5WWL2-F1-model_v4 | 1 | 220 | 18 | 241 | 0.5445 |
0.6763 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 2 | 267 | 1 | 274 | 0.5441 |
0.8193 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 1 | 296 | 1 | 454 | 0.5159 |
0.8077 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 296 | 300 | 1360 | 0.4865 |
0.8502 |
| A0A239QLG0 | GT2 | 1 | 257 | 1 | 264 | 0.4801 |
0.8429 |
| QWT52131.1 | GT2 | 1 | 252 | 1 | 525 | 0.4612 |
0.8428 |
| A0A829WPC6 | GT2 , GT4 | 1 | 264 | 262 | 530 | 0.4559 |
0.8339 |
| C6LFR9 | GT2 , GT4 | 1 | 260 | 300 | 1259 | 0.4465 |
0.8815 |
| A0A2T4T973 | GT2 , GT4 | 1 | 281 | 260 | 516 | 0.4355 |
0.8095 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 279 | 232 | 487 | 0.4151 |
0.7706 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P9E9V2 | GT2 , GT4 | 1 | 296 | 300 | 1360 | 0.4865 |
0.8502 |
| A0A239QLG0 | GT2 | 1 | 257 | 1 | 264 | 0.4801 |
0.8429 |
| QWT52131.1 | GT2 | 1 | 252 | 1 | 525 | 0.4612 |
0.8428 |
| A0A829WPC6 | GT2 , GT4 | 1 | 264 | 262 | 530 | 0.4559 |
0.8339 |
| C6LFR9 | GT2 , GT4 | 1 | 260 | 300 | 1259 | 0.4465 |
0.8815 |
| A0A2T4T973 | GT2 , GT4 | 1 | 281 | 260 | 516 | 0.4355 |
0.8095 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6zxd-assembly1.cif.gz_z | 1 | 220 | 15 | 263 | 0.4609 |
0.6183 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.