PROTEIN: HRGMv2_2154_4_64
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Protein File & Metadata
Source:
HRGMv2_2154_4_64.pdb
Genome ID:
Protein ID:
HRGMv2_2154_4_64
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Protein Sequence
MRTEMKEKKL NADLYISDKS RITLEEVKNI FQDAEEKNIK TIHFGKGIYC LTEWECREAL 60 SIAHDDGCGD IHEKDCHIYL ENLENLTLEG ECTETGEPAT ILAGFNSRIS HTLLPSVLWA 120 ENCKNLTIEN LAFTRKPECA SSGEIVKIEK GCIFVSVFPG NPCYDKMAAY CMNRFSIKEK 180 ALLGESLTYG FGYDRRFSLV GERLLMLEDE ALSSKVHVGE GLSWHQAGKT DF 232
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5B8VQW2-F1-model_v4 | GH110 | 1 | 232 | 5 | 248 | 0.5967 |
0.7244 |
| AF-A0A0M4BTC3-F1-model_v4 | GH110 | 7 | 232 | 21 | 247 | 0.5867 |
0.7179 |
| AF-A0A7Z2VQ35-F1-model_v4 | GH110 | 3 | 232 | 1 | 223 | 0.5861 |
0.711 |
| A0A3N0F545 | GH0 | 4 | 232 | 21 | 269 | 0.5585 |
0.814 |
| AF-A0A1Q2MIK2-F1-model_v4 | GH110 | 4 | 232 | 26 | 277 | 0.5505 |
0.8029 |
| AF-A0A5K7S3T6-F1-model_v4 | GH110 | 5 | 232 | 29 | 275 | 0.5413 |
0.7917 |
| AF-A9YYJ5-F1-model_v4 | GH110 | 45 | 232 | 1 | 222 | 0.5372 |
0.6778 |
| QZO76004.1 | GH110 | 4 | 209 | 31 | 191 | 0.5339 |
0.7042 |
| AF-Q8A2Z5-F1-model_v4 | GH110 | 1 | 232 | 9 | 262 | 0.5044 |
0.726 |
| Q8A2Z5 | GH110 | 1 | 232 | 9 | 262 | 0.5044 |
0.726 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5B8VQW2 | GH110 | 1 | 232 | 5 | 248 | 0.5967 |
0.7244 |
| A0A7Z2VQ35 | GH110 | 3 | 232 | 1 | 223 | 0.5861 |
0.711 |
| A0A1Q2MIK2 | GH110 | 4 | 232 | 26 | 277 | 0.5505 |
0.8029 |
| A0A5K7S3T6 | GH110 | 5 | 232 | 29 | 275 | 0.5413 |
0.7917 |
| QZO76004.1 | GH110 | 4 | 209 | 31 | 191 | 0.5339 |
0.7042 |
| Q8A2Z5 | GH110 | 1 | 232 | 9 | 262 | 0.5044 |
0.726 |
| A0A1H1ZLF3 | GH110 | 1 | 232 | 7 | 269 | 0.5013 |
0.7288 |
| A0A1B1S916 | GH110 | 1 | 232 | 23 | 282 | 0.4994 |
0.7317 |
| A0A7G5DZB0 | GH110 | 7 | 232 | 24 | 260 | 0.498 |
0.7386 |
| A0A7G1HQD8 | GH110 | 2 | 232 | 20 | 248 | 0.4954 |
0.7218 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7jw4-assembly1.cif.gz_A-2 | 6 | 232 | 1 | 269 | 0.4849 |
0.7196 |
| 7jwf-assembly1.cif.gz_A | 7 | 232 | 1 | 261 | 0.4849 |
0.7202 |
| 7jw4-assembly2.cif.gz_B | 6 | 232 | 4 | 269 | 0.4846 |
0.7192 |
| 7jwf-assembly2.cif.gz_C-2 | 7 | 232 | 1 | 260 | 0.4831 |
0.7168 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8A2Z5-F1-model_v4 | 1 | 232 | 9 | 262 | 0.5044 |
0.7259 |
| AF-Q64XV2-F1-model_v4 | 2 | 232 | 19 | 277 | 0.4939 |
0.7229 |
| AF-Q5LGZ8-F1-model_v4 | 2 | 232 | 19 | 277 | 0.4926 |
0.721 |
| AF-Q5L7M8-F1-model_v4 | 7 | 232 | 23 | 249 | 0.4922 |
0.7379 |
| AF-Q64MU6-F1-model_v4 | 7 | 232 | 23 | 249 | 0.4917 |
0.7371 |
| AF-Q89ZX0-F1-model_v4 | 3 | 232 | 21 | 278 | 0.4912 |
0.7284 |
| AF-A6KWM0-F1-model_v4 | 2 | 232 | 16 | 274 | 0.4898 |
0.7161 |
| AF-B1KD83-F1-model_v4 | 3 | 232 | 26 | 258 | 0.4803 |
0.7105 |
| AF-A6L2M8-F1-model_v4 | 7 | 232 | 21 | 247 | 0.48 |
0.7196 |
| AF-Q826C5-F1-model_v4 | 1 | 232 | 31 | 279 | 0.4794 |
0.7087 |