PROTEIN: HRGMv2_2154_20_12
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Protein File & Metadata
Source:
HRGMv2_2154_20_12.pdb
Genome ID:
Protein ID:
HRGMv2_2154_20_12
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Protein Sequence
MEKLIYSKYS NERGRRFSLR TDILEQDGMR IVRKTPVGKE GEAHVASLAK WREELEKAFQ 60 DSPFVCNKCT LEGKSAVLEY VSGETLEERL DSLLKQGEKE EAEKLLTGYL TEIEKIYKGR 120 IFETTEEFTK VFGETVFFQE MECAEVTDID MVCQNLVLTN PPVVLDYEWT FDFPVPGKFV 180 LYRVIHYYIR TNPMREVLDE DILYRKLGIT PSMRSQFEKM EACFQKYLTE GHIPMREMYA 240 DMTPGAMWRQ EKYEQLQREN RELKEEIKRK NHLIREMKNT KIWKLYRKYR KMVERK 296
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5WWL2-F1-model_v4 | 1 | 240 | 18 | 245 | 0.5426 |
0.6531 |
| AF-Q54W07-F1-model_v4 | 1 | 240 | 32 | 252 | 0.5341 |
0.6702 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 2 | 248 | 1 | 243 | 0.5325 |
0.8736 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 1 | 294 | 1 | 657 | 0.5005 |
0.7891 |
| A0A239QLG0 | GT2 | 1 | 256 | 1 | 267 | 0.4838 |
0.8513 |
| A0A829WPC6 | GT2 , GT4 | 1 | 267 | 262 | 529 | 0.4747 |
0.8605 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 294 | 300 | 665 | 0.4591 |
0.8063 |
| QWT52131.1 | GT2 | 1 | 263 | 1 | 441 | 0.454 |
0.7962 |
| A0A2T4T973 | GT2 , GT4 | 1 | 296 | 261 | 894 | 0.4516 |
0.7386 |
| C6LFR9 | GT2 , GT4 | 1 | 257 | 300 | 1288 | 0.451 |
0.9009 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 268 | 232 | 470 | 0.4192 |
0.8319 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A239QLG0 | GT2 | 1 | 256 | 1 | 267 | 0.4838 |
0.8513 |
| A0A829WPC6 | GT2 , GT4 | 1 | 267 | 262 | 529 | 0.4747 |
0.8605 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 294 | 300 | 665 | 0.4591 |
0.8063 |
| QWT52131.1 | GT2 | 1 | 263 | 1 | 441 | 0.454 |
0.7962 |
| A0A2T4T973 | GT2 , GT4 | 1 | 296 | 261 | 894 | 0.4516 |
0.7386 |
| C6LFR9 | GT2 , GT4 | 1 | 257 | 300 | 1288 | 0.451 |
0.9009 |
| A0A7G8WHK4 | GT4 | 1 | 250 | 395 | 677 | 0.4034 |
0.6622 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7szc-assembly1.cif.gz_A | 1 | 222 | 15 | 229 | 0.557 |
0.6843 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q54W07-F1-model_v4 | 1 | 240 | 32 | 252 | 0.5341 |
0.6702 |