PROTEIN: HRGMv2_2154_11_36
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Protein File & Metadata
Source:
HRGMv2_2154_11_36.pdb
Genome ID:
Protein ID:
HRGMv2_2154_11_36
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Protein Sequence
MFGILYIVLS FLAGKEFAGF LLAEEKSREK RGNQIWLLAS ASFGIGTLLL TWCVYVAAWF 60 LRVCMDSENP LFYGNLAVMA GTAAGLFFLY FYRIRHKGNL KIQGLIPDRR LLKKECVLYG 120 LLFLFLMYIM FYVFYIRDGI LYSGFTVYGD YAPHTAMMRS FSMGENFPTQ YPHFGGEDVK 180 YHFMFQFLVG NLEFLGLRLD IAYNLVSVFS LLGFLIFLCQ MAMRITGSFA AGAWALVLFF 240 FRSGITFFRF LWEHFQSGDL WKALSENTEF LGYTTNENWG LWNFNVYLNQ RHLAFGLLIA 300 GIVIWVFLDY LEEGAAHEEK GFAWIKGRLF AKEAWQCRNL EKALLLGMIL GLTSFWNGAA 360 VIGGLLILLG FAAFSDGKLD YGIMAAVTVF FSVLQSRIFV RGSVMSPAIQ WGFLAEDKSL 420 AGVIWYLIQI SGFFVAGLAM LVFWLRRRER TMLVSFLFPL FFAFLVSLTP DINVNHKYIM 480 ISWAFLTVFW GGVLSKCWRG KCRKKLLAFI LTVCLTATGL YDFVIILRNN GPGRRVAVNM 540 ESDLTAWLSE NLISEDLILT PEYSMSEVTM SGVMMYCGWP YYAWSAGYNT NYRAGVATEM 600 YTTGDQKRLK ALVQQEGITY ILYQEGMTFE EKNCREDTIA SAYPLVYQSE DGRIRIYET 659
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A143QCP4-F1-model_v4 | GT85 | 24 | 659 | 4 | 630 | 0.6263 |
0.6623 |
| AF-A0A4P8Q4R8-F1-model_v4 | GT85 | 14 | 659 | 1 | 614 | 0.6203 |
0.6592 |
| AF-A0A410W5X2-F1-model_v4 | GT85 | 27 | 659 | 3 | 636 | 0.6082 |
0.639 |
| QXG77167.1 | GT85 | 24 | 659 | 37 | 666 | 0.6035 |
0.6488 |
| AF-S5SRG6-F1-model_v4 | GT85 | 26 | 659 | 16 | 662 | 0.5988 |
0.6395 |
| AF-A0A6H9XQP0-F1-model_v4 | GT85 | 27 | 659 | 21 | 670 | 0.5938 |
0.6394 |
| AF-A9GFC3-F1-model_v4 | GT89 | 110 | 659 | 35 | 536 | 0.586 |
0.6982 |
| A0A8H9Y7K3 | GT85 | 27 | 659 | 55 | 700 | 0.5858 |
0.6411 |
| AF-A0A2L0ERP1-F1-model_v4 | GT89 | 110 | 659 | 52 | 548 | 0.5852 |
0.7096 |
| AF-A0A5Q0C359-F1-model_v4 | GT83 | 103 | 659 | 11 | 483 | 0.5817 |
0.6988 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| W5XYU2 | GT85 | 22 | 659 | 1 | 602 | 0.6241 |
0.6694 |
| D6ZD63 | GT85 | 19 | 659 | 1 | 614 | 0.6238 |
0.6643 |
| P9WN02 | GT85 | 22 | 659 | 18 | 638 | 0.6192 |
0.664 |
| A0A7H0JZ40 | GT85 | 27 | 659 | 2 | 614 | 0.6189 |
0.6582 |
| A0A975MX64 | GT85 | 24 | 659 | 13 | 632 | 0.6152 |
0.6575 |
| A0A516X797 | GT85 | 18 | 659 | 1 | 654 | 0.6149 |
0.6452 |
| I4BQW1 | GT85 | 19 | 659 | 2 | 653 | 0.6141 |
0.6465 |
| A0A076MHF5 | GT85 | 24 | 659 | 18 | 648 | 0.6095 |
0.6485 |
| A0A562EN01 | GT85 | 19 | 659 | 34 | 662 | 0.6088 |
0.656 |
| A0A410W5X2 | GT85 | 27 | 659 | 3 | 636 | 0.6082 |
0.639 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8if8-assembly1.cif.gz_B | 18 | 659 | 3 | 619 | 0.624 |
0.6626 |
| 8agb-assembly1.cif.gz_A | 29 | 659 | 1 | 608 | 0.5477 |
0.5991 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P55583-F1-model_v4 | 1 | 658 | 11 | 662 | 0.7443 |
0.7712 |
| AF-A0R611-F1-model_v4 | 21 | 659 | 1 | 614 | 0.6255 |
0.6688 |
| AF-P9WN02-F1-model_v4 | 22 | 659 | 18 | 638 | 0.6194 |
0.6639 |
| AF-A8Y3M2-F1-model_v4 | 26 | 659 | 23 | 687 | 0.5441 |
0.5923 |