PROTEIN: HRGMv2_2135_6_89
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2135_6_89.pdb
Genome ID:
Protein ID:
HRGMv2_2135_6_89
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MRADVKRYIL ILILLLLLVL GIDSNHKSQM EIKLDSQNWE EAQDRHGMSQ AVFTTPLGKG 60 VYEGSLSYEA QEDGEWEILD MDRNNGENEL GDLVKSGKIQ AGTNDFDFWF VLDDKTDNLK 120 MTIYAGEGDI QVFSCKLENM EDGYLDSVFL FLVLAAFTSA IFLLKSRPGG WNWIFVIGMG 180 IFLASPVLGE AIYWGDDIYF HLNRILGIAQ GMQDGQFPVR MNYFFNYGYG FINPILYPEL 240 FLYIPAFFCI LGASIFTSYK IFILLINITA AIVSYSSFKG LFKDEKKGLL CTFFYLLIPY 300 RIANFYARAA IGEALAAIFL PLLFLGVYEL LFRNEKKWYL AAIAASGIIQ SHILSVELSV 360 FFCVLVFVAA LPGIFKRKEW IRFWEVIKAG IVVIAVNTWF LLPFLEQCRY EYCLLTAREN 420 LYQYALTPWE MFVSFGKYPV SLGLSILIGS VGFIYLAYYK RKFGLQEKKL GQACLMLGGI 480 SCYMASIYFP WRWIQENEMS NKILGVIQFP WRLLGFGAVF FAIILALFVD KVRQEKRQMM 540 ISVLVIISLL GAVQSMGNKI YDSKPYLQNR DDVVKSAEYI DYYRDASALE TARERGNRII 600 TEEYIKISQY MKEGGNLTFF FQAENVGNDL YFHCPFYNYG AYKAYLDGEE IPVYTDSQNM 660 VMLQISKQIT EGQIQVQYVG RKLYRVGDLI SVISAFLMVC FWGCKRYKSF RGRKKTDK 718
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CFT8-F1-model_v4 | 163 | 713 | 1 | 538 | 0.7657 |
0.8887 |
| AF-A0A5P3FT45-F1-model_v4 | 1 | 713 | 1 | 540 | 0.7531 |
0.8681 |
| AF-A0A133CH43-F1-model_v4 | 1 | 708 | 1 | 544 | 0.7464 |
0.8574 |
| AF-A0A1S8IUA0-F1-model_v4 | 163 | 713 | 10 | 566 | 0.7074 |
0.821 |
| AF-A0A133CH37-F1-model_v4 | 261 | 712 | 1 | 451 | 0.6564 |
0.8292 |
| AF-K0EUF9-F1-model_v4 | 169 | 716 | 1 | 724 | 0.5843 |
0.7702 |
| AF-K0EVD5-F1-model_v4 | 166 | 716 | 9 | 730 | 0.5828 |
0.7683 |
| AF-K0EMA3-F1-model_v4 | 166 | 716 | 40 | 759 | 0.5809 |
0.7726 |
| AF-K0EV20-F1-model_v4 | 176 | 718 | 1 | 709 | 0.5766 |
0.7577 |
| AF-Q8DMX0-F1-model_v4 | 162 | 712 | 1 | 850 | 0.5716 |
0.7983 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZH0-F1-model_v4 | GT2 | 162 | 718 | 1 | 602 | 0.6366 |
0.8517 |
| AF-A0A3P8KFA5-F1-model_v4 | GT85 | 11 | 639 | 35 | 572 | 0.5357 |
0.6689 |
| UYZ58515.1 | GT83 | 165 | 594 | 16 | 455 | 0.5336 |
0.7318 |
| AF-A0A517NEP0-F1-model_v4 | GT83 | 165 | 658 | 7 | 555 | 0.5123 |
0.6597 |
| AF-D1AF54-F1-model_v4 | GT2 | 160 | 718 | 357 | 1032 | 0.5001 |
0.7517 |
| AF-A0A7D3VZV1-F1-model_v4 | GT2 | 160 | 718 | 357 | 1037 | 0.4997 |
0.7581 |
| AF-A0A4P6Q284-F1-model_v4 | GT2 | 156 | 716 | 351 | 1030 | 0.4995 |
0.7523 |
| AF-Q47LX5-F1-model_v4 | GT2 | 160 | 716 | 355 | 1033 | 0.4992 |
0.754 |
| AF-A0A7H8M992-F1-model_v4 | GT2 | 162 | 718 | 376 | 1039 | 0.4987 |
0.7603 |
| AF-A0A223SBL3-F1-model_v4 | GT2 | 160 | 718 | 355 | 1036 | 0.4985 |
0.7539 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZH0 | GT2 | 162 | 718 | 1 | 602 | 0.6366 |
0.8517 |
| UYZ58515.1 | GT83 | 165 | 594 | 16 | 455 | 0.5336 |
0.7318 |
| A0A0N7F2F5 | GT85 | 11 | 639 | 56 | 598 | 0.523 |
0.662 |
| A0A517NEP0 | GT83 | 165 | 658 | 7 | 555 | 0.5123 |
0.6597 |
| A0A5Q2RJ38 | GT2 | 1 | 718 | 174 | 1086 | 0.5094 |
0.6264 |
| A0A6H1R323 | GT2 | 159 | 716 | 326 | 1029 | 0.5021 |
0.7469 |
| A0A1H2LEN9 | GT2 | 165 | 715 | 360 | 976 | 0.5 |
0.7356 |
| A0A430JTH8 | GT2 | 166 | 716 | 363 | 1036 | 0.4947 |
0.7449 |
| A0A8I0GD51 | GT2 | 164 | 716 | 426 | 1088 | 0.4945 |
0.7575 |
| A0A1H1SV19 | GT2 | 160 | 718 | 348 | 1038 | 0.4944 |
0.7533 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42377-F1-model_v4 | 163 | 718 | 12 | 614 | 0.7158 |
0.8569 |
| AF-O31582-F1-model_v4 | 163 | 709 | 1 | 859 | 0.5645 |
0.7991 |
| AF-P9WN02-F1-model_v4 | 11 | 674 | 41 | 643 | 0.5351 |
0.6087 |