PROTEIN: HRGMv2_2135_5_74
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Protein File & Metadata
Source:
HRGMv2_2135_5_74.pdb
Genome ID:
Protein ID:
HRGMv2_2135_5_74
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Detailed structural information will appear here after analysis...
Protein Sequence
MKKRLYHILV NQVPGIRSRY LSFRKKKPGI WGQLTAWLLL FWWHFLYWIA GQKSLGLPLS 60 YGYYEEKPLL LRESAHTPPP SIESLAEKLK VFDVISFDIF DTLLVRPFSK PEDLFYLLGM 120 KLKYPDFPLL RMQAEQEARE RCQRACGSTE VRLEEIWEVL APITGLKKEE GIRLEKETEE 180 EYCQGNPYFI RLLHELRQTG KPLFLTSDMY LDKEFLVKLL EQTGLGSFCE ALISCEYRVS 240 KANGGLYRIL REKGEKLQGK NCSIAHVGDN RHSDIYMAQK ARIAAFWYPN PQETGNPFRP 300 MDMSAITGTM YRGTVNLKLH TQGVLYSPFY EYGYIYGGLC AMGYCRFLHK RAKERGIENL 360 WFLSRDGEIL KKIYDFLYPK ENTAYILWSR NVSLRLSAKA YPHEFFQRFL FQKADQGYSI 420 ENIFSSMKLL PLLEQACHSL CCSPKDKLTT KKASALQDFF LSQWNQVNSM YQEELVLAAS 480 YLESKRKKGK RLGIVDIGWT GSGALGLSYV LREACRLPYT PCSFLGGTAT CHNPSPDVSQ 540 GFFFQGEMES YFFSQEHNRD LWKFHDLHRK HNLYIELLFT SPSPSFRGFG KNKKGEIIFL 600 FGEEERHKKE IREIQKGIWD FVQDYEKYFG ALLEKSEAAV SGRDAYAPIL LFLKDRKLQR 660 RLEKSFFWDA RENVE 675
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 103 | 675 | 1 | 580 | 0.7268 |
0.8363 |
| AF-Q0P8I2-F1-model_v4 | 70 | 675 | 54 | 870 | 0.5195 |
0.6965 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WII09730.1 | GT111 | 16 | 675 | 139 | 931 | 0.6511 |
0.7809 |
| A0A975E9I4 | GT2 | 29 | 675 | 229 | 997 | 0.6375 |
0.7978 |
| WAJ24550.1 | GT2 | 71 | 675 | 136 | 937 | 0.6264 |
0.8402 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 45 | 675 | 148 | 1006 | 0.623 |
0.8014 |
| A0A974WXG9 | GT4 | 31 | 675 | 153 | 1021 | 0.6216 |
0.8068 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 72 | 675 | 321 | 941 | 0.6205 |
0.8376 |
| U5MZQ8 | GT2 | 72 | 675 | 321 | 941 | 0.6205 |
0.8376 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 70 | 675 | 134 | 942 | 0.6169 |
0.8293 |
| UKD35065.1 | GT111 | 71 | 675 | 100 | 814 | 0.6092 |
0.7921 |
| A0A0U3BMS4 | GT111 | 68 | 675 | 130 | 847 | 0.6038 |
0.789 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WII09730.1 | GT111 | 16 | 675 | 139 | 931 | 0.6511 |
0.7809 |
| A0A975E9I4 | GT2 | 29 | 675 | 229 | 997 | 0.6375 |
0.7978 |
| WAJ24550.1 | GT2 | 71 | 675 | 136 | 937 | 0.6264 |
0.8402 |
| A0A078BDS9 | GT2 | 45 | 675 | 148 | 1006 | 0.623 |
0.8014 |
| A0A974WXG9 | GT4 | 31 | 675 | 153 | 1021 | 0.6216 |
0.8068 |
| U5MZQ8 | GT2 | 72 | 675 | 321 | 941 | 0.6205 |
0.8376 |
| UKD35065.1 | GT111 | 71 | 675 | 100 | 814 | 0.6092 |
0.7921 |
| A0A0U3BMS4 | GT111 | 68 | 675 | 130 | 847 | 0.6038 |
0.789 |
| A0A1H2DMX7 | GT2 | 1 | 675 | 241 | 1525 | 0.5757 |
0.7994 |
| D5MIK3 | GT4 | 6 | 675 | 130 | 1453 | 0.5717 |
0.788 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly1.cif.gz_B | 91 | 674 | 242 | 845 | 0.5874 |
0.7946 |
| 8a0m-assembly2.cif.gz_D | 91 | 674 | 271 | 856 | 0.5685 |
0.7725 |
| 8a0m-assembly2.cif.gz_C | 91 | 675 | 376 | 993 | 0.5592 |
0.7959 |
| 8a0c-assembly1.cif.gz_A | 91 | 675 | 380 | 997 | 0.5589 |
0.7965 |
| 8a0m-assembly1.cif.gz_A | 91 | 675 | 375 | 992 | 0.5588 |
0.7949 |
| 8a0c-assembly1.cif.gz_B | 91 | 674 | 380 | 991 | 0.5571 |
0.7945 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.