PROTEIN: HRGMv2_2135_50_5
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Protein File & Metadata
Source:
HRGMv2_2135_50_5.pdb
Genome ID:
Protein ID:
HRGMv2_2135_50_5
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Protein Sequence
MRLGIYTGSH KDSEGKRDMK KVIKTVVFCI ILVAIAFLYG HIAKLHNIYD KNIDTSEYQS 60 TEILSNKGVR QTFVCEEEYL DGVRIKSMVS NSSEDTQIHY QLINMEENQV VSSGTIQGKD 120 VENSKFFEIS FARVTGSKGK TFELFLYSDS SSDEKDGVKF SYQPVTEEGT SFVEADKEIT 180 EGTLILKTVT NRFDWETFIV FLGFALYVIL FMRFLYNLFK 220
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1S8M8R4-F1-model_v4 | GT2 , GT4 | 7 | 195 | 391 | 945 | 0.4268 |
0.8206 |
| AF-A0A0E3PR73-F1-model_v4 | GT2 | 5 | 220 | 199 | 1065 | 0.4238 |
0.7312 |
| AF-Q97GN9-F1-model_v4 | GT0 , GT2 | 4 | 195 | 749 | 944 | 0.4097 |
0.777 |
| AF-R4K848-F1-model_v4 | GT0 , GT2 | 21 | 195 | 531 | 926 | 0.398 |
0.817 |
| AF-A0A0E3QJR3-F1-model_v4 | GT2 | 32 | 211 | 79 | 663 | 0.3979 |
0.7555 |
| AF-A0A0E3L941-F1-model_v4 | GT2 | 31 | 220 | 302 | 1093 | 0.3911 |
0.76 |
| AF-A0A0H3J786-F1-model_v4 | GT0 , GT2 | 32 | 196 | 534 | 939 | 0.3815 |
0.8356 |
| AF-A0A0E3PHH4-F1-model_v4 | GT2 | 1 | 220 | 74 | 1084 | 0.3756 |
0.6433 |
| AF-D2RDR5-F1-model_v4 | GT2 | 10 | 197 | 102 | 603 | 0.3672 |
0.7238 |
| A0A2P8MIG1 | GT0 , GT2 | 52 | 196 | 791 | 945 | 0.3535 |
0.8703 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0E3PR73 | GT2 | 5 | 220 | 199 | 1065 | 0.4238 |
0.7312 |
| A0A0E3L941 | GT2 | 31 | 220 | 302 | 1093 | 0.3911 |
0.76 |
| D2RDR5 | GT2 | 10 | 197 | 102 | 603 | 0.3672 |
0.7238 |
| A0A2P8MIG1 | GT0 , GT2 | 52 | 196 | 791 | 945 | 0.3535 |
0.8703 |
| A0A2N9YI34 | GT2 , GT4 | 28 | 220 | 286 | 817 | 0.3449 |
0.6783 |
| A0A7S8EVX5 | GT2 | 43 | 220 | 725 | 885 | 0.3384 |
0.7213 |
| A0A136Q663 | GT2 | 32 | 209 | 46 | 428 | 0.3351 |
0.6349 |
| AIN57274.1 | GT2 | 45 | 189 | 1113 | 1248 | 0.2992 |
0.8027 |
| G6YKG6 | GT2 , GT4 | 45 | 189 | 1113 | 1248 | 0.2952 |
0.7861 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8h2i-assembly1.cif.gz_bG | 32 | 199 | 138 | 367 | 0.3975 |
0.7096 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.