PROTEIN: HRGMv2_2135_2_42
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Protein File & Metadata
Source:
HRGMv2_2135_2_42.pdb
Genome ID:
Protein ID:
HRGMv2_2135_2_42
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Protein Sequence
MGIMKVRIRI ADPAGNITIF VLSRADRKDY PYISRQLLAV EELKGEQVGF VEQHNGAFHM 60 QMMGGEFCAN ASRSFASLLA MGATGESMEL EISVSGATRP LKAWVDKEAG TSRVEMPLPD 120 AIETLSLGDE LFPMVIFDGI CHILVPGKPR EEDFIWEAVE RAKKACPCGA WGIMFLQDRE 180 MIPVVYVEET GSMVWEGSCG SGTTAAAIWM FRNKEDGEYA CILKQPGGQM EARVKMEGGR 240 AVACSVGGPV LLSQEMEVEI EERRLT 266
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FVE4-F1-model_v4 | 1 | 261 | 1 | 273 | 0.8107 |
0.8609 |
| AF-A0A132Z6F5-F1-model_v4 | 6 | 260 | 1 | 266 | 0.7699 |
0.8222 |
| AF-Q9PMD8-F1-model_v4 | 6 | 261 | 1 | 249 | 0.7671 |
0.8152 |
| AF-Q51564-F1-model_v4 | 4 | 262 | 1 | 276 | 0.7647 |
0.8192 |
| AF-O25290-F1-model_v4 | 6 | 266 | 1 | 273 | 0.7644 |
0.8089 |
| AF-Q5F9Q4-F1-model_v4 | 3 | 262 | 1 | 283 | 0.7589 |
0.8198 |
| AF-Q32FX9-F1-model_v4 | 5 | 262 | 2 | 297 | 0.7549 |
0.8388 |
| AF-P40788-F1-model_v4 | 5 | 262 | 2 | 297 | 0.7546 |
0.8386 |
| AF-P37757-F1-model_v4 | 5 | 262 | 2 | 297 | 0.7525 |
0.837 |
| AF-K0F8U8-F1-model_v4 | 3 | 264 | 1 | 296 | 0.7491 |
0.82 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6jiw-assembly1.cif.gz_A-2 | 4 | 261 | 1 | 263 | 0.85 |
0.8909 |
| 6jis-assembly1.cif.gz_A-2 | 4 | 260 | 1 | 263 | 0.8452 |
0.8899 |
| 6l4l-assembly1.cif.gz_A | 4 | 263 | 1 | 259 | 0.8325 |
0.8642 |
| 2otn-assembly1.cif.gz_A | 1 | 264 | 5 | 293 | 0.7708 |
0.8338 |
| 7vdy-assembly1.cif.gz_B | 3 | 261 | 1 | 279 | 0.7679 |
0.8269 |
| 5h2g-assembly1.cif.gz_B | 2 | 263 | 1 | 280 | 0.7642 |
0.8159 |
| 5ha4-assembly1.cif.gz_A | 4 | 263 | 1 | 280 | 0.7596 |
0.8166 |
| 1qy9-assembly2.cif.gz_C | 5 | 262 | 1 | 296 | 0.7509 |
0.8338 |
| 4ik0-assembly1.cif.gz_A | 6 | 260 | 1 | 274 | 0.7485 |
0.812 |
| 4jci-assembly1.cif.gz_A | 1 | 264 | 3 | 309 | 0.7467 |
0.8316 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3JU78-F1-model_v4 | 1 | 261 | 1 | 273 | 0.8551 |
0.9013 |
| AF-Q9PJW2-F1-model_v4 | 1 | 263 | 4 | 269 | 0.7945 |
0.8281 |
| AF-B9KED6-F1-model_v4 | 6 | 261 | 1 | 249 | 0.7871 |
0.8332 |
| AF-A6GYX5-F1-model_v4 | 6 | 258 | 1 | 256 | 0.7848 |
0.8294 |
| AF-Q64SY7-F1-model_v4 | 2 | 263 | 1 | 269 | 0.7818 |
0.8208 |
| AF-O29511-F1-model_v4 | 4 | 265 | 1 | 279 | 0.7795 |
0.8307 |
| AF-Q9ZDB7-F1-model_v4 | 2 | 262 | 1 | 270 | 0.7784 |
0.8206 |
| AF-A8GND7-F1-model_v4 | 2 | 262 | 1 | 270 | 0.778 |
0.8202 |
| AF-Q68WW4-F1-model_v4 | 2 | 262 | 1 | 270 | 0.7773 |
0.8198 |
| AF-C4K2A3-F1-model_v4 | 2 | 262 | 1 | 270 | 0.7746 |
0.8172 |