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PROTEIN: HRGMv2_2128_1_825

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2128_1_825.pdb
Genome ID:
HRGMv2_2128
Protein ID:
HRGMv2_2128_1_825

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Detailed structural information will appear here after analysis...

Protein Sequence 
MEKKKIWKEE   RFQVLVLVLA   AFLLLTAWAF   MQPLGAGPDE   KMRYMVAQYL   HKHPGKLPLG 60
DDPAIRDATW   GISYAYYPIL   SYMVSAVFMG   IAGLFHASAD   GLLHAARMAD   VLFVTGSVYF 120
VVKASGKLFP   KEGRWLFAAL   AGFMPQALFL   GTYVNTDSLA   LLSMGIILYS   WSCYLEEGDW 180
SFKNSILLAV   GMAVCALSYY   NAYGWILCSF   LFFCLTVLLC   REEPVKQRIA   FLFRRGIVIA 240
AVTLVLCGWW   FVRNAILYDG   DFIGRKACAE   CAEKYAAIDY   RPSRYPTPEK   LKWTWKDILL 300
YQDPGWNHNW   LLTVLVSFIG   TFGLMQIYMP   YGVSKAYFLL   FGIGGLGVLS   MLGMFYPKKR 360
TVVKERKTSG   TEKLKIKTVT   VSNKWDRKGI   FHLLMILLIL   IPVGLFMYYV   YYSDNQAQGR 420
YIMPALYPAM   YFVTAGWNRL   LERFVKKENI   RMWIYRGLSA   LLVASPFLCY   IFLVVPFYR 479
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EYW2-F1-model_v4 3 479 19 488 0.6737 0.7201
AF-K0EMC6-F1-model_v4 3 479 48 527 0.6694 0.7207
AF-Q9CD61-F1-model_v4 3 479 14 496 0.6647 0.7062
AF-X8F0H0-F1-model_v4 3 479 32 503 0.6541 0.7058
AF-K0EZH5-F1-model_v4 3 479 32 527 0.6497 0.7073
AF-Q9HUZ2-F1-model_v4 6 479 4 381 0.6238 0.7916
AF-A0A044V8J8-F1-model_v4 2 478 28 522 0.6075 0.6564
AF-C1HCE0-F1-model_v4 1 479 50 726 0.6002 0.737
AF-C0NYG5-F1-model_v4 1 479 52 728 0.6001 0.7367
AF-A0A0D2F012-F1-model_v4 1 479 51 727 0.5984 0.7372
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-D1CEC5-F1-model_v4 GT39 2 479 12 427 0.7108 0.7999
AF-A0A7D4BBL3-F1-model_v4 GT39 3 479 6 409 0.7069 0.8
AF-A0A1C7D8B0-F1-model_v4 GT39 2 479 4 410 0.7068 0.7955
AF-A0A0G3X7K5-F1-model_v4 GT39 2 479 5 409 0.7059 0.7974
AF-A0A0F7KTT7-F1-model_v4 GT39 3 479 5 410 0.7056 0.796
AF-A0A515L6J0-F1-model_v4 GT39 2 479 5 411 0.7043 0.7937
AF-A0A6G6XCA5-F1-model_v4 GT39 3 479 6 410 0.7043 0.7969
AF-A0A7T0R126-F1-model_v4 GT39 2 479 4 409 0.7041 0.7935
AF-A0A7S8IUK0-F1-model_v4 GT39 2 479 5 409 0.7032 0.7946
AF-A0A222ETR5-F1-model_v4 GT39 2 479 5 409 0.7031 0.7946
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1S6H5E4 GT39 3 479 1 398 0.7198 0.8159
D1CEC5 GT39 2 479 12 427 0.7108 0.7999
A0A8E2H3U6 GT39 3 479 4 406 0.709 0.8019
A0A0G3XG27 GT39 2 479 8 412 0.6981 0.7915
A0A6F9WZW7 GT39 5 479 11 407 0.698 0.8047
W0AAL2 GT39 5 479 11 406 0.6978 0.8015
A0A419R5Z1 GT39 3 479 9 413 0.6967 0.7902
A0A068MUE4 GT39 1 479 7 472 0.6937 0.7428
G2IJ82 GT39 6 479 19 416 0.6916 0.8007
A0A0B5BD88 GT39 5 479 1 400 0.6896 0.7981
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7zlh-assembly1.cif.gz_A 2 479 1 505 0.5618 0.6608
7zlg-assembly1.cif.gz_A 2 479 1 511 0.5609 0.6629
7zli-assembly1.cif.gz_A 2 479 1 511 0.5606 0.662
7oci-assembly1.cif.gz_F 1 479 2 413 0.5256 0.6967
8b6l-assembly1.cif.gz_I 1 479 1 479 0.5246 0.627
3wak-assembly1.cif.gz_A 1 479 1 497 0.5104 0.6614
7e9s-assembly1.cif.gz_A 2 479 1 496 0.5073 0.6593
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8NRZ6-F1-model_v4 3 479 27 506 0.6634 0.7106
AF-L8F4Z2-F1-model_v4 3 479 30 502 0.658 0.7079
AF-Q1MJ94-F1-model_v4 6 479 4 366 0.6056 0.8115
AF-O67270-F1-model_v4 9 479 1 399 0.6011 0.7402
AF-Q1MLH5-F1-model_v4 6 479 1 344 0.5989 0.8236
AF-Q9C100-F1-model_v4 1 479 47 722 0.5982 0.7324
AF-Q48HY9-F1-model_v4 6 479 1 423 0.597 0.7184
AF-Q9UKY4-F1-model_v4 1 479 48 730 0.5943 0.7317
AF-P42377-F1-model_v4 1 479 6 427 0.5917 0.7571
AF-Q4ZSZ0-F1-model_v4 6 479 1 424 0.5904 0.7191
Download Full SwissProt Results