PROTEIN: HRGMv2_2117_8_8
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Protein File & Metadata
Source:
HRGMv2_2117_8_8.pdb
Genome ID:
Protein ID:
HRGMv2_2117_8_8
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Detailed structural information will appear here after analysis...
Protein Sequence
MGTQIVKMKI MELDNYFFIA RPCVDIADQK VQELVEKADE HDLDFVGIVY ENVGLPEGVT 60 YDKELFIGKD PAYVMLVRNI CSGLYSKGFI EKNHLEIGGS DELFPDIYLL WQVFTSAGRA 120 MCVSAAICEK VYRDTVWIDD SQIAFTVNRA YDRIKDMLMT DWELWQKWKG YYSFQRWACY 180 YELLHWMTED VGWEFAERMA VEFHRSYEND EIDEKLFSLE ERSTLYILAK DPGYVKRFYL 240 GKVILDKRVY DCKDMVNDFE KVVAEKDRMM QAQRKSYERR LAKKQAEHEE MCSRLEQQRL 300 LELEQQKQKY ESSVTFKAGR VIMFIPSGIK RLVFRMMKKE 340
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P8I0-F1-model_v4 | 4 | 262 | 18 | 445 | 0.5531 |
0.8147 |
| AF-A0A0H3GV76-F1-model_v4 | 4 | 264 | 19 | 353 | 0.5396 |
0.784 |
| AF-Q0P8H6-F1-model_v4 | 4 | 261 | 18 | 603 | 0.4456 |
0.8005 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U3BMN5-F1-model_v4 | GT2 | 30 | 254 | 1 | 241 | 0.6511 |
0.8317 |
| AF-A0A1D3L380-F1-model_v4 | GT2 | 4 | 312 | 14 | 398 | 0.6293 |
0.7604 |
| A0A425WI61 | GT2 | 4 | 293 | 13 | 382 | 0.6193 |
0.7953 |
| A0A892ZHL1 | GT2 | 4 | 243 | 66 | 322 | 0.6172 |
0.8522 |
| A5ZUY3 | GT2 | 4 | 259 | 13 | 344 | 0.6147 |
0.8459 |
| AF-A0A1U9JWX1-F1-model_v4 | GT2 | 5 | 242 | 69 | 320 | 0.609 |
0.8434 |
| AF-D5HHY1-F1-model_v4 | GT2 | 5 | 269 | 67 | 354 | 0.6088 |
0.8254 |
| AF-A0A6L7IXX3-F1-model_v4 | GT2 | 5 | 249 | 67 | 328 | 0.6053 |
0.8459 |
| A0A172RXC0 | GT2 | 5 | 245 | 72 | 329 | 0.6045 |
0.8382 |
| AF-A0A0S2CGX8-F1-model_v4 | GT2 | 5 | 249 | 73 | 337 | 0.6045 |
0.8365 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A425WI61 | GT2 | 4 | 293 | 13 | 382 | 0.6193 |
0.7953 |
| A0A892ZHL1 | GT2 | 4 | 243 | 66 | 322 | 0.6172 |
0.8522 |
| A5ZUY3 | GT2 | 4 | 259 | 13 | 344 | 0.6147 |
0.8459 |
| A0A1U9JWX1 | GT2 | 5 | 242 | 69 | 320 | 0.609 |
0.8434 |
| A0A6L7IXX3 | GT2 | 5 | 249 | 67 | 328 | 0.6053 |
0.8459 |
| A0A172RXC0 | GT2 | 5 | 245 | 72 | 329 | 0.6045 |
0.8382 |
| A0A1D8D5W6 | GT2 | 7 | 242 | 1 | 257 | 0.6031 |
0.8116 |
| B0ZTM7 | GT2 | 4 | 253 | 18 | 340 | 0.602 |
0.829 |
| A0A5P4S851 | GT2 | 4 | 256 | 65 | 326 | 0.5962 |
0.7871 |
| QPK94328.1 | GT2 | 4 | 287 | 66 | 374 | 0.596 |
0.7678 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.