PROTEIN: HRGMv2_2076_15_19
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Protein File & Metadata
Source:
HRGMv2_2076_15_19.pdb
Genome ID:
Protein ID:
HRGMv2_2076_15_19
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Protein Sequence
MKKKVLSALL TTAMLASMLV GCGNSNDAPA AASSEAAPAA STEAAASTEV AAEPAAEEGK 60 VLNIYAWNEE FKSRLIAHYP GYEEVDGTTG KIGDVTVKWN ITPSNDNAYQ NNLDANLLKQ 120 ADAAADDKID MFLIEADYAL KYVDTDYTMP ISDLGITDAD LANQYQYTKD IVTDSKGVLK 180 GVSWQGCPGV LIYSRDVAKE VLGSDDPAEV QKAVADWDTF TATAEKMKKA GYFMTSSAND 240 TYRVYSNNVS GKWVQDGKIV VDDNIMKWVE DSKKMVDAKE TNTYDLWSDD WSKGFYPDGK 300 VFCYFGPAWF VDFSMAADVD GSIANAGKWG ATEGPQGFFW GGTWACAAQG TDNASLVKDI 360 ILKMTTDTDI MTDIVKDDND FVNNVPAMEA MAADTSYSSK VLGGQNPLAM YCAGAKKIDL 420 SNLSAYDQGC NESFQNAMKN YFEGKTDLDG ALDLFYKAVE EKYPELTH 468
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CPC5-F1-model_v4 | 54 | 467 | 30 | 423 | 0.7064 |
0.8094 |
| AF-K0F2E6-F1-model_v4 | 10 | 467 | 30 | 436 | 0.7041 |
0.7996 |
| AF-P71619-F1-model_v4 | 56 | 467 | 33 | 428 | 0.7025 |
0.812 |
| AF-A0A132Z3C8-F1-model_v4 | 59 | 466 | 33 | 428 | 0.6912 |
0.7946 |
| AF-Q8DRJ6-F1-model_v4 | 59 | 468 | 62 | 499 | 0.5333 |
0.6462 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 466 | 226 | 866 | 0.5384 |
0.7058 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 466 | 226 | 866 | 0.5384 |
0.7058 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 57 | 464 | 1 | 393 | 0.8069 |
0.8901 |
| 3uor-assembly2.cif.gz_B | 60 | 467 | 1 | 388 | 0.7473 |
0.8393 |
| 8bfy-assembly1.cif.gz_A | 60 | 465 | 1 | 393 | 0.7435 |
0.8261 |
| 6x84-assembly2.cif.gz_B | 57 | 467 | 1 | 411 | 0.7409 |
0.8074 |
| 7vfq-assembly1.cif.gz_A | 59 | 468 | 1 | 394 | 0.7366 |
0.8168 |
| 7vfq-assembly2.cif.gz_B | 59 | 468 | 1 | 396 | 0.7358 |
0.8139 |
| 2z8d-assembly2.cif.gz_B | 54 | 468 | 1 | 399 | 0.7357 |
0.8117 |
| 7vfr-assembly1.cif.gz_A | 58 | 468 | 1 | 397 | 0.7353 |
0.8124 |
| 6wpn-assembly1.cif.gz_A | 61 | 468 | 1 | 395 | 0.735 |
0.8147 |
| 2z8d-assembly1.cif.gz_A | 55 | 468 | 1 | 401 | 0.7344 |
0.8087 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 57 | 464 | 26 | 422 | 0.7482 |
0.8482 |
| AF-Q926H8-F1-model_v4 | 59 | 467 | 20 | 428 | 0.6908 |
0.7725 |
| AF-O31518-F1-model_v4 | 49 | 466 | 25 | 427 | 0.6849 |
0.775 |
| AF-Q8YCA7-F1-model_v4 | 59 | 467 | 25 | 433 | 0.6822 |
0.7659 |
| AF-Q2YKR5-F1-model_v4 | 59 | 467 | 25 | 433 | 0.6807 |
0.7644 |
| AF-Q8FW10-F1-model_v4 | 59 | 467 | 25 | 433 | 0.68 |
0.7637 |
| AF-Q8UB32-F1-model_v4 | 59 | 468 | 26 | 436 | 0.6789 |
0.7631 |
| AF-P58300-F1-model_v4 | 29 | 466 | 4 | 434 | 0.6355 |
0.6839 |
| AF-P55454-F1-model_v4 | 57 | 443 | 44 | 358 | 0.6337 |
0.8209 |
| AF-Q9V297-F1-model_v4 | 24 | 467 | 1 | 453 | 0.6266 |
0.6695 |