PROTEIN: HRGMv2_2055_60_38
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Protein File & Metadata
Source:
HRGMv2_2055_60_38.pdb
Genome ID:
Protein ID:
HRGMv2_2055_60_38
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Protein Sequence
MDDSIKTYKC PNCGAALTFD SKTQKLHCSH CDTSIDVEAM KALSDTPSST DQDNARWNTS 60 DAGSNWSSSE QQGMRSYHCP TCGAELVTDE TTAASTCAYC GSPVVLSDHL SGAKRPNYVI 120 PFKVDKKTAK ETLKNFYKGK IFLPRAFSAE NHLEEISGIY VPFWLYSCES NGSFSFDATR 180 THHYTDGDYD VTETEHYLVL RDGEARFNNI PVDGSSKMDD AYMDAIEPFD YSAITDFHTD 240 YLPGYAAQTY DEDATACAPR ATARVKNTTI AAIRRTCDYT TLTPRTSKIS TTQNSVDYAL 300 LPVWMLTTNW HGKSYHFAIN GQTGKLIGDL PIDKGRFFSL LAGITIPLGI LLKLFIF 357
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CT57-F1-model_v4 | 69 | 357 | 46 | 392 | 0.6515 |
0.8479 |
| AF-Q385J7-F1-model_v4 | 49 | 357 | 1 | 269 | 0.5594 |
0.7999 |
| AF-A4I0U5-F1-model_v4 | 50 | 357 | 1 | 266 | 0.5422 |
0.7911 |
| AF-Q4CXP5-F1-model_v4 | 56 | 357 | 8 | 265 | 0.5414 |
0.7965 |
| AF-Q4DN10-F1-model_v4 | 56 | 357 | 73 | 331 | 0.509 |
0.7934 |
| AF-Q54L05-F1-model_v4 | 91 | 342 | 36 | 455 | 0.5007 |
0.7823 |
| AF-A4HVV3-F1-model_v4 | 14 | 347 | 45 | 315 | 0.4746 |
0.7305 |
| AF-Q57X75-F1-model_v4 | 9 | 351 | 4 | 341 | 0.4537 |
0.5831 |
| AF-Q4DUW3-F1-model_v4 | 44 | 350 | 39 | 311 | 0.4518 |
0.6853 |
| AF-Q75J87-F1-model_v4 | 49 | 352 | 64 | 423 | 0.4418 |
0.6142 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O34434-F1-model_v4 | 71 | 357 | 56 | 341 | 0.6522 |
0.8045 |