PROTEIN: HRGMv2_2055_49_56
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Protein File & Metadata
Source:
HRGMv2_2055_49_56.pdb
Genome ID:
Protein ID:
HRGMv2_2055_49_56
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Protein Sequence
MVLANNIEGR GRQLLLPYAI YGAFAFLAMV LEKNDFFVAA GCVLLVAAAV MGLYFYKKDQ 60 SLVSFRFLLS VFWTAGEGLG VMQLSNLQSS WTNQTWLSFG GFYFLFLAGY EAIEIYLSKR 120 VIVLESKCQM SKKEVTKEQF QNRLFCCIRI VSLVTFATFV LEAVILGYVP LFSTETHAYD 180 HFHISGVHYF TVSCMFTHSL TLIYMLTYTE KKKDRQPLEK GKLIQLIVYN ALSASIPILS 240 VSKFQFVLTL ALPILIFLLM RPNVNKKKLF AMLGAAAAVV IAAAVFMTIR RNYEPGYLNS 300 IFQMKNENMP LFLQYAYMYI ANNYSNFNCL TQALHQGLVE HTFGLKQLFP VFALTGLKFV 360 FPALVAFEMP VTIKELNTLT LIYDAYYDFG LIGVFLFGLI LGAVCAALTQ KIRKSSNPIL 420 YLFYAQLALY LALSFFSSWF TVPTTWFWFA LTGALYLYVK K 461
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32EG1-F1-model_v4 | 28 | 461 | 1 | 373 | 0.7215 |
0.8221 |
| AF-Q8CYN0-F1-model_v4 | 9 | 461 | 6 | 471 | 0.6782 |
0.7252 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6I5WLM1-F1-model_v4 | GT4 | 30 | 461 | 41 | 466 | 0.5392 |
0.769 |
| WBY64485.1 | GT4 | 4 | 461 | 2 | 463 | 0.5317 |
0.7095 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVP94250.1 | GT4 | 34 | 461 | 1 | 439 | 0.5595 |
0.7697 |
| A0A6I5WLM1 | GT4 | 30 | 461 | 41 | 466 | 0.5392 |
0.769 |
| WBY64485.1 | GT4 | 4 | 461 | 2 | 463 | 0.5317 |
0.7095 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A8ACU6-F1-model_v4 | 31 | 461 | 3 | 425 | 0.6993 |
0.7708 |
| AF-B7MR15-F1-model_v4 | 31 | 461 | 3 | 425 | 0.6984 |
0.7698 |
| AF-C4ZZ61-F1-model_v4 | 31 | 461 | 3 | 425 | 0.6976 |
0.769 |
| AF-B4TB26-F1-model_v4 | 31 | 461 | 3 | 425 | 0.6974 |
0.7704 |
| AF-B5FN87-F1-model_v4 | 31 | 461 | 3 | 425 | 0.6973 |
0.7702 |
| AF-B7NF99-F1-model_v4 | 31 | 461 | 3 | 425 | 0.6971 |
0.7684 |
| AF-Q8FBP8-F1-model_v4 | 32 | 461 | 1 | 425 | 0.6921 |
0.7605 |
| AF-C6DHE3-F1-model_v4 | 32 | 461 | 1 | 424 | 0.6838 |
0.7622 |