PROTEIN: HRGMv2_2054_80_2
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Protein File & Metadata
Source:
HRGMv2_2054_80_2.pdb
Genome ID:
Protein ID:
HRGMv2_2054_80_2
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Protein Sequence
MTMTKQDRIC MISLFAVMLV LMGVPALCLS TNTVVDELGT LTNTALLTGR NWGTGILSNG 60 GYYYRYGMAF VWLLPFLIFK DPIMVYKAAS FVNALLMATT PVMAYYISRR YLKIEKEKDA 120 ALLAAGSAII SSVMFQAIYL RGDMMLIVLN WVCALLILNA MYAKTKKERQ VYTILLSFCA 180 VYAYACHSRG IVMVIASAMT VLLVPFFTKE KERRIPYISF FGSMAVLLVI DKVLVKYFRH 240 AIWGNGAAHA TGIPEGTLKL LTKGTGIKSY IRMAIGWLYN SFSSTLGLVC VGLIACVIII 300 FLMIRRSEKV TSQEGTLALF GFLSYAGSFV LGTVFFLKSV KKNFYGTSKL RVDRIVYDRY 360 ICCAFGILCM VALYVLIWKR DLFGIRAKML SVAGCGLTLV LFSVITAPYL NNQSFVRKYM 420 GMLCTFVKTH AGKLTFEGKH VSGGVILFGV VALLLFLLVL FLCQKKKGYQ ACALTLLVSV 480 MLFGYNVKNI TLSENNTREA RISSASSLIL SFGDIYKEYS YVWAEETAAP IKSYQVRLMD 540 YHLIGEEYQS FNDTDNVFVI AKKLPNEKKL KSGAYYLIDG EAYDNKKEDF VYVKGTKLKE 600 ALEERGVSLT AYTG 614
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HY61-F1-model_v4 | 6 | 597 | 2 | 549 | 0.6496 |
0.7033 |
| AF-Q9HUZ2-F1-model_v4 | 9 | 614 | 8 | 478 | 0.648 |
0.753 |
| AF-P76473-F1-model_v4 | 5 | 611 | 1 | 550 | 0.6412 |
0.694 |
| AF-O52327-F1-model_v4 | 5 | 611 | 1 | 547 | 0.6401 |
0.6949 |
| AF-Q32DT1-F1-model_v4 | 5 | 611 | 1 | 550 | 0.6398 |
0.6928 |
| AF-A0A0H3GZQ8-F1-model_v4 | 5 | 611 | 1 | 551 | 0.6395 |
0.6919 |
| AF-Q8VDB2-F1-model_v4 | 2 | 614 | 2 | 486 | 0.6336 |
0.7225 |
| AF-Q8ZP99-F1-model_v4 | 1 | 614 | 4 | 513 | 0.6333 |
0.7096 |
| AF-K0EVQ0-F1-model_v4 | 2 | 599 | 1 | 552 | 0.6314 |
0.6797 |
| AF-K0EVV4-F1-model_v4 | 1 | 599 | 24 | 661 | 0.6301 |
0.6852 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A060A3J1-F1-model_v4 | GT83 | 2 | 611 | 1 | 546 | 0.6926 |
0.752 |
| AF-F9ZPC2-F1-model_v4 | GT83 | 4 | 611 | 3 | 546 | 0.6912 |
0.7525 |
| AF-D5MI18-F1-model_v4 | GT83 | 1 | 612 | 13 | 566 | 0.6902 |
0.7513 |
| AF-E1QIE7-F1-model_v4 | GT83 | 3 | 609 | 3 | 575 | 0.687 |
0.7362 |
| AF-A0A059ZVT9-F1-model_v4 | GT83 | 3 | 612 | 2 | 546 | 0.6858 |
0.7459 |
| AF-A0A0B6CRR3-F1-model_v4 | GT83 | 1 | 611 | 1 | 588 | 0.6849 |
0.7188 |
| AF-A0A097EMF3-F1-model_v4 | GT83 | 4 | 613 | 1 | 574 | 0.6817 |
0.724 |
| AF-A0A6M3HUM2-F1-model_v4 | GT83 | 6 | 611 | 5 | 595 | 0.6816 |
0.7165 |
| AF-A0A0E1N4J0-F1-model_v4 | GT83 | 1 | 611 | 1 | 588 | 0.6793 |
0.7126 |
| AF-C6BZ51-F1-model_v4 | GT83 | 1 | 613 | 3 | 620 | 0.6778 |
0.7016 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6N2DAU7 | GT83 | 1 | 598 | 5 | 576 | 0.6985 |
0.7492 |
| A0A4P6HEB7 | GT83 | 4 | 599 | 27 | 492 | 0.6906 |
0.8282 |
| D5MI18 | GT83 | 1 | 612 | 13 | 566 | 0.6902 |
0.7513 |
| A0A6C2YNQ2 | GT83 | 1 | 597 | 18 | 504 | 0.6885 |
0.7949 |
| E1QIE7 | GT83 | 3 | 609 | 3 | 575 | 0.687 |
0.7362 |
| D8P8B9 | GT83 | 1 | 607 | 17 | 586 | 0.6856 |
0.7455 |
| A0A1Y0HA72 | GT83 | 4 | 597 | 11 | 488 | 0.6853 |
0.791 |
| Q1Q622 | GT83 | 1 | 613 | 1 | 536 | 0.6822 |
0.7452 |
| A0A097EMF3 | GT83 | 4 | 613 | 1 | 574 | 0.6817 |
0.724 |
| A0A5C1AAJ9 | GT83 | 4 | 611 | 2 | 551 | 0.6811 |
0.7379 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 5 | 614 | 1 | 541 | 0.6612 |
0.7206 |
| 5ezm-assembly1.cif.gz_A | 4 | 614 | 1 | 537 | 0.6513 |
0.7127 |
| 5gmy-assembly1.cif.gz_A | 2 | 614 | 4 | 820 | 0.5169 |
0.6083 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67270-F1-model_v4 | 6 | 595 | 1 | 499 | 0.6691 |
0.7513 |
| AF-Q1MJ97-F1-model_v4 | 1 | 598 | 1 | 494 | 0.6549 |
0.7404 |
| AF-Q3KCB9-F1-model_v4 | 4 | 600 | 1 | 549 | 0.6505 |
0.7028 |
| AF-A6V1N8-F1-model_v4 | 6 | 597 | 2 | 549 | 0.6502 |
0.7041 |
| AF-Q4ZSZ0-F1-model_v4 | 3 | 611 | 1 | 550 | 0.6498 |
0.7012 |
| AF-Q4KC80-F1-model_v4 | 5 | 611 | 1 | 549 | 0.6497 |
0.7019 |
| AF-Q9HY61-F1-model_v4 | 6 | 597 | 2 | 549 | 0.6496 |
0.7033 |
| AF-Q02R27-F1-model_v4 | 5 | 597 | 1 | 549 | 0.6483 |
0.7013 |
| AF-B7VBN0-F1-model_v4 | 6 | 597 | 2 | 549 | 0.6481 |
0.702 |
| AF-A8GDR9-F1-model_v4 | 3 | 597 | 1 | 555 | 0.6475 |
0.6972 |