PROTEIN: HRGMv2_2054_2_50
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Protein File & Metadata
Source:
HRGMv2_2054_2_50.pdb
Genome ID:
Protein ID:
HRGMv2_2054_2_50
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Protein Sequence
MSDTVIVLQD ECILTASGKS GKLPKVDRVS RIPIEPFGDT FEQWKAALKE YNEEYMPKSL 60 KIVLPASYSS ARITQVPYAA GRQLSKMAKN VVDEHKGEDI ADYSVVQSDK KKGVCLCCGS 120 AQNDIIRQIM DFCTELKLPV KEISVPMEGY LKLLSQSKAY KNKTAIFLLF EENSVTSILY 180 KEGMCLYTTR SRIFSEPGTL NFGTEIVRSI SGMMQFYATT KSETPITDVY YTGCLEDDFE 240 VSIEGIKNMN LNVEKMKIDI PFQAKGDPQF WLSCIGGMIV DKKRKEINLL PVWKEENKEE 300 VIKNVDILSH IVVPLATLGV CMVLFAAVTV WNFHTTGQIN EINDWINDEQ VQAAYQEANA 360 LQQKSDKLAE AQDQVRQMTA NLDTYPDLTK KMISTIVDAS GRDMEVHIKT MDADTGKLTF 420 DAVSQKVIDI PTYVQKLQKT GLFASVDYTG YSYQSEEETY SLALSCILKS NETETETETG 480 GAEN 484
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FAC8-F1-model_v4 | 1 | 282 | 27 | 371 | 0.5577 |
0.8222 |
| AF-P45068-F1-model_v4 | 1 | 370 | 8 | 425 | 0.5405 |
0.6665 |
| AF-G3XD28-F1-model_v4 | 1 | 283 | 8 | 354 | 0.5369 |
0.7692 |
| AF-Q5F6M2-F1-model_v4 | 1 | 323 | 6 | 413 | 0.5312 |
0.7299 |
| AF-P47203-F1-model_v4 | 1 | 339 | 8 | 415 | 0.5294 |
0.6998 |
| AF-Q32JZ8-F1-model_v4 | 1 | 285 | 7 | 393 | 0.5229 |
0.8086 |
| AF-Q7CR80-F1-model_v4 | 1 | 285 | 7 | 393 | 0.5223 |
0.8069 |
| AF-A0A0H3GJA5-F1-model_v4 | 1 | 285 | 7 | 393 | 0.522 |
0.8063 |
| AF-Q0PAI4-F1-model_v4 | 1 | 292 | 3 | 390 | 0.5 |
0.7873 |
| AF-A0A133CJ11-F1-model_v4 | 1 | 295 | 5 | 389 | 0.4943 |
0.7548 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2ych-assembly1.cif.gz_A | 1 | 284 | 3 | 336 | 0.5703 |
0.7947 |
| 5eou-assembly1.cif.gz_A | 1 | 295 | 2 | 333 | 0.5662 |
0.7595 |
| 5eou-assembly2.cif.gz_B | 1 | 292 | 1 | 352 | 0.5653 |
0.7859 |
| 3jc8-assembly1.cif.gz_Ma | 1 | 283 | 3 | 355 | 0.5562 |
0.7989 |
| 7q6i-assembly4.cif.gz_D | 1 | 283 | 1 | 362 | 0.5552 |
0.8053 |
| 7q6g-assembly1.cif.gz_A | 1 | 285 | 3 | 388 | 0.5453 |
0.8119 |
| 7q6d-assembly1.cif.gz_A | 1 | 283 | 3 | 383 | 0.5445 |
0.8112 |
| 7q6i-assembly2.cif.gz_B | 1 | 284 | 2 | 383 | 0.5379 |
0.7979 |
| 3wt0-assembly3.cif.gz_C | 1 | 286 | 1 | 374 | 0.5275 |
0.7694 |
| 1e4g-assembly1.cif.gz_T | 1 | 282 | 3 | 380 | 0.5252 |
0.7814 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67900-F1-model_v4 | 1 | 286 | 24 | 298 | 0.5825 |
0.7862 |
| AF-P45068-F1-model_v4 | 1 | 370 | 8 | 425 | 0.5405 |
0.6665 |
| AF-Q89AQ4-F1-model_v4 | 1 | 298 | 7 | 421 | 0.5379 |
0.7993 |
| AF-G3XD28-F1-model_v4 | 1 | 283 | 8 | 354 | 0.5369 |
0.7692 |
| AF-P47203-F1-model_v4 | 1 | 339 | 8 | 415 | 0.5294 |
0.6998 |
| AF-P57309-F1-model_v4 | 1 | 285 | 7 | 393 | 0.5267 |
0.8131 |
| AF-Q9K0X8-F1-model_v4 | 1 | 319 | 6 | 411 | 0.5229 |
0.7233 |
| AF-P0ABH1-F1-model_v4 | 1 | 285 | 7 | 393 | 0.5228 |
0.8077 |
| AF-P0ABH2-F1-model_v4 | 1 | 285 | 7 | 393 | 0.5221 |
0.8065 |
| AF-P0A331-F1-model_v4 | 1 | 331 | 23 | 443 | 0.5195 |
0.7188 |