PROTEIN: HRGMv2_2040_41_4
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Protein File & Metadata
Source:
HRGMv2_2040_41_4.pdb
Genome ID:
Protein ID:
HRGMv2_2040_41_4
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Protein Sequence
MNKSFEIKGY INNVLKEIGL EGADAFDKAL LLNALGKLEA AEHSDEYKDV ITGELDKLIQ 60 DNTINMGEND LVNYMYGNAC YSVGKNDIAV NIAKQTERQP RTESGYFTGA EGNRCLCTAF 120 KALSFYMNYE TKDGGKEHYN DIIAQYNAIY AECFENAGKA AHDGDAKAVK ALALFAAGAV 180 DTLEVMDQAL YEIFARIREM YKAAVSVLND TIDNTDSQFV KLIYAYAVMK GCRMKLIQTE 240 KYAANAEDIF GKATDKHVAD KSSVAVSAAY ITAYSEYIRN RAYQDYGRSN GGVLWS 296
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6P1TRX3-F1-model_v4 | GH105 | 1 | 285 | 1 | 369 | 0.7807 |
0.9107 |
| A0A414PYA2 | GH105 | 1 | 291 | 2 | 379 | 0.7777 |
0.9006 |
| AF-A0A6S6RAA6-F1-model_v4 | GH105 | 2 | 282 | 1 | 366 | 0.7769 |
0.9152 |
| AF-A0A6S6R3M5-F1-model_v4 | GH105 | 2 | 282 | 1 | 366 | 0.7723 |
0.9102 |
| AF-A0A223HXA1-F1-model_v4 | GH105 | 3 | 287 | 1 | 364 | 0.7716 |
0.8951 |
| AF-A0A5P9NPK4-F1-model_v4 | GH0 | 1 | 288 | 2 | 358 | 0.769 |
0.879 |
| AF-D1APZ0-F1-model_v4 | GH105 | 6 | 285 | 1 | 362 | 0.769 |
0.9049 |
| AF-I3VRQ9-F1-model_v4 | GH105 | 2 | 281 | 1 | 361 | 0.7674 |
0.902 |
| AF-U5L9H0-F1-model_v4 | GH105 | 1 | 293 | 1 | 381 | 0.7673 |
0.8866 |
| AF-F6BKC0-F1-model_v4 | GH105 | 2 | 281 | 1 | 361 | 0.7668 |
0.9013 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A414PYA2 | GH105 | 1 | 291 | 2 | 379 | 0.7777 |
0.9006 |
| D1APZ0 | GH105 | 6 | 285 | 1 | 362 | 0.769 |
0.9049 |
| A0A1V4H6Z1 | GH105 | 1 | 293 | 5 | 337 | 0.7625 |
0.8463 |
| A0A174KDJ3 | GH105 | 3 | 281 | 1 | 373 | 0.7625 |
0.9114 |
| A0A061ABK0 | GH105 | 1 | 286 | 1 | 381 | 0.7624 |
0.8987 |
| G0GE29 | GH105 | 1 | 284 | 4 | 367 | 0.7611 |
0.8901 |
| A0A7G8T934 | GH105 | 1 | 286 | 3 | 382 | 0.7526 |
0.8969 |
| A0A7U6I562 | GH105 | 3 | 283 | 1 | 384 | 0.7508 |
0.903 |
| A0A858B7B9 | GH105 | 1 | 296 | 1 | 391 | 0.7446 |
0.8775 |
| D1BWY7 | GH105 | 1 | 290 | 15 | 387 | 0.7424 |
0.8839 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.