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PROTEIN: HRGMv2_2040_11_39

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Protein File & Metadata
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Source:
HRGMv2_2040_11_39.pdb
Genome ID:
HRGMv2_2040
Protein ID:
HRGMv2_2040_11_39

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKRLLSLAL   GTMMVLSTLA   GCGSKNGGST   AVNTNPDEQG   KVLNIYCWNE   EFKSRFEGYY 60
KNVPSDVKVN   WVITPNENNA   YQNALDAALL   KQKDAAADDK   IDMFLIEADY   ALKYVNSDYT 120
LDVKDIGLTD   DDLKDMYQYT   KDIATDSNGK   LKATTWQATP   GLFAYRRSIA   KDVLGTDDPD 180
KVQEALSTWD   KFDKVAEQAA   AKGYKMLSGY   DDSYRVFSNN   VSAPWVDSNN   KIVIDDNIMK 240
WVDQTKKYTD   KGYNNKSSLW   DSTWAADQGP   SGKVFGFFYS   TWGINFTLLG   NSLATPVKEG 300
GKEEVGNGIY   GDYAVCEGPQ   SYYWGGTWIC   AAAGTDNANL   VKDVMKTLCC   DKATMKKITE 360
DTQDYTNTTS   GMNEIANSNF   KSDFLGGQNH   IKLFAKSAPK   ISMKNISSYD   QGLNEEFQKA 420
MKDYFDGNVT   KDKALDNFYK   AAIEKYPNLS   K 451
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F002-F1-model_v4 20 449 31 439 0.7419 0.8205
AF-K0F2E6-F1-model_v4 15 450 29 436 0.722 0.8048
AF-Q2G1E9-F1-model_v4 13 450 20 418 0.7178 0.8011
AF-A0A133CPC5-F1-model_v4 36 449 31 423 0.7171 0.8105
AF-P71619-F1-model_v4 30 450 30 428 0.7157 0.8087
AF-A0A132Z3C8-F1-model_v4 40 448 32 428 0.7089 0.7997
AF-K0EMP7-F1-model_v4 26 450 23 443 0.7064 0.7677
AF-Q8DNN7-F1-model_v4 39 449 33 435 0.7059 0.7922
AF-A0A132ZDH4-F1-model_v4 36 443 28 427 0.7026 0.7859
AF-Q8DNU8-F1-model_v4 36 450 37 440 0.7009 0.7877
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 37 450 31 416 0.6793 0.7771
AF-K8E205-F1-model_v4 GH32 37 429 32 344 0.6303 0.7943
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 450 48 797 0.5594 0.7216
A0A9Q8PNJ5 GH4 1 449 257 866 0.5581 0.7412
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 37 450 31 416 0.6793 0.7771
K8E205 GH32 37 429 32 344 0.6303 0.7943
A0A1Q2TKJ3 GH49 1 450 48 797 0.5594 0.7216
A0A9Q8PNJ5 GH4 1 449 257 866 0.5581 0.7412
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5ixp-assembly1.cif.gz_A 37 447 1 393 0.8243 0.894
3uor-assembly2.cif.gz_B 41 450 1 388 0.7698 0.8504
6x84-assembly2.cif.gz_B 37 450 1 411 0.7549 0.8091
8bfy-assembly1.cif.gz_A 41 448 1 393 0.7516 0.823
7c6z-assembly1.cif.gz_A 41 450 1 415 0.7502 0.8078
4rk2-assembly1.cif.gz_A 36 447 1 393 0.75 0.8187
7c71-assembly2.cif.gz_B 41 450 1 415 0.7467 0.8044
7vfq-assembly1.cif.gz_A 40 451 1 394 0.7461 0.8147
7c6x-assembly7.cif.gz_G 42 450 1 414 0.746 0.8062
2z8d-assembly2.cif.gz_B 35 451 1 399 0.7457 0.8102
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 37 447 25 422 0.7694 0.855
AF-P94528-F1-model_v4 39 448 32 433 0.7596 0.8462
AF-Q9K491-F1-model_v4 33 449 29 424 0.7347 0.8252
AF-Q9KEE7-F1-model_v4 40 449 44 445 0.733 0.8294
AF-Q8FVS7-F1-model_v4 37 449 22 411 0.7156 0.8049
AF-Q578M8-F1-model_v4 37 449 22 411 0.7149 0.8041
AF-Q2YKZ9-F1-model_v4 37 449 22 411 0.7131 0.8023
AF-Q53684-F1-model_v4 35 449 23 423 0.7061 0.8066
AF-A0QXD9-F1-model_v4 12 449 38 477 0.7035 0.7622
AF-O31518-F1-model_v4 35 449 29 427 0.6997 0.7853
Download Full SwissProt Results