PROTEIN: HRGMv2_2017_2_178
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Protein File & Metadata
Source:
HRGMv2_2017_2_178.pdb
Genome ID:
Protein ID:
HRGMv2_2017_2_178
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Protein Sequence
MKKICYNWSI SLLIGLFSLF IFSSVGFILG LTINSAYPLL SVVLSIFTLW YLTIKKDNFS 60 NKNFIAQLIL LFDLILIFGA VCYFIPDFSY DGTTYHQASI IWLKWGWNPI YTKLSTFATT 120 MPYQFPSSLE YGQHFLKFFE IIGANIYALT GKIELTKITN FLFTLISFCY TFYSIKNYKN 180 IPNWQVSIFA FLFVFNPVCI YQTLTNYVDC AFYYAFLILM FALINYTKTQ DNNALFMIVM 240 SSIIFANIKL TGLFTVLIML IAFLIVCFTK NLLKVSILVA FLILLTGINP YITNIISGYN 300 PLYPVVKNSF LNANKEYMTT SYPTGFENAN RFKKLFISTF SSSRNLSPLI NKDKPTLKIP 360 FTITNDDIFH FEDMRVGGFG YFFSGILLCS LILSAFLRFK NKDDKRLFFV IMTILVLSVL 420 GNHEAWWARF VPQMWSFPLF IMLFFLYNEQ FKDKKQTLIY ILLFIAFLNS AIIAQQYLND 480 RIKLAQQRVE WINSLKLQGG QIYISPEEKQ QVPLLETMPI KLEEQGIKVI N 531
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 1 | 483 | 1 | 398 | 0.6368 |
0.7544 |
| A0A2S2CG33 | GT83 | 75 | 531 | 25 | 446 | 0.6223 |
0.7519 |
| AF-A0A2S2CG33-F1-model_v4 | GT83 | 75 | 531 | 25 | 446 | 0.6223 |
0.7519 |
| AF-Q6LJA7-F1-model_v4 | GT83 | 75 | 531 | 22 | 444 | 0.6219 |
0.7513 |
| AF-A9IF37-F1-model_v4 | GT83 | 5 | 531 | 5 | 447 | 0.6202 |
0.7206 |
| AF-A0A806K0R0-F1-model_v4 | CBM51 | 24 | 531 | 40 | 566 | 0.5293 |
0.6592 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S6H5E4 | GT39 | 1 | 483 | 1 | 398 | 0.6368 |
0.7544 |
| A0A7M2ZZ44 | GT83 | 75 | 531 | 18 | 441 | 0.634 |
0.7607 |
| A0A2S2CG33 | GT83 | 75 | 531 | 25 | 446 | 0.6223 |
0.7519 |
| A0A3M4VJW3 | GT83 | 1 | 531 | 2 | 456 | 0.6136 |
0.7018 |
| BCA78249.1 | GT83 | 74 | 531 | 20 | 460 | 0.6117 |
0.7338 |
| A0A1B3X237 | GT83 | 1 | 531 | 2 | 443 | 0.6102 |
0.712 |
| A0A411PDC9 | GT83 | 1 | 531 | 1 | 426 | 0.6037 |
0.725 |
| A0A516WBX8 | GT83 | 74 | 531 | 53 | 489 | 0.5951 |
0.7282 |
| A0A518BNE9 | GT83 | 57 | 531 | 41 | 537 | 0.5744 |
0.6802 |
| A0A806K0R0 | CBM51 | 24 | 531 | 40 | 566 | 0.5293 |
0.6592 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.