PROTEIN: HRGMv2_1974_16_6
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Protein File & Metadata
Source:
HRGMv2_1974_16_6.pdb
Genome ID:
Protein ID:
HRGMv2_1974_16_6
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Detailed structural information will appear here after analysis...
Protein Sequence
MNSTAINYEK FTVNGSININ SVDVDLANNS MGHFSADEYG ESNGNIDVKG VNLISDSHDS 60 ATKVLFADSS YADTVTYSGA SHAYSTIYKY NVGYNPDDGF FTFVRSSGSM NPSDNFNPSV 120 LTTPVSAQSG AYSTQMQTFN YAFQHADNFM SLPIFERIAL KESGRYAMTG SAGIYSPLLT 180 RIENAGYWVK PYVSFENIPL RNGPKVNTIA YGSLIGFDSS IKPVKYGFDR VLTGYIGYNG 240 ASQNYSGVDT YQNGGLLGGT VTLYRGNFFN AITLSAGASL GESHTMYGKD NFTMLLAGIG 300 NKLGYNFEFK DGKYIIQPSM LMSYTFVNTF DYTNSAGVHI DSDPLHAIQL TPGVKFIMNT 360 KNGWQPYVGI NMVWNILNKN KVTANDVRLP EMSIKPYVQY GLGVQKRIKD KFLAFGQAMV 420 SNGGRNGVSL SFGLRWFIGK 440
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P77286-F1-model_v4 | 1 | 438 | 1 | 466 | 0.7464 |
0.7886 |
| AF-Q32HY9-F1-model_v4 | 1 | 438 | 235 | 684 | 0.6722 |
0.8275 |
| AF-Q9HXM3-F1-model_v4 | 57 | 439 | 11 | 298 | 0.6428 |
0.8033 |
| AF-Q9HTN0-F1-model_v4 | 27 | 440 | 11 | 316 | 0.6343 |
0.7739 |
| AF-Q9I108-F1-model_v4 | 38 | 438 | 2 | 303 | 0.6312 |
0.764 |
| AF-Q32H48-F1-model_v4 | 1 | 438 | 388 | 864 | 0.6238 |
0.8339 |
| AF-Q32DV7-F1-model_v4 | 1 | 438 | 252 | 720 | 0.6228 |
0.7821 |
| AF-Q9I160-F1-model_v4 | 106 | 438 | 14 | 306 | 0.6215 |
0.7758 |
| AF-P33924-F1-model_v4 | 1 | 438 | 415 | 863 | 0.6165 |
0.824 |
| AF-Q0PC76-F1-model_v4 | 151 | 438 | 22 | 284 | 0.59 |
0.7802 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A510K0F4-F1-model_v4 | GH135 | 1 | 438 | 223 | 765 | 0.5345 |
0.6861 |
| AF-A0A0H3DS31-F1-model_v4 | GH33 | 1 | 440 | 1 | 670 | 0.5308 |
0.6488 |
| AF-D0ZFQ6-F1-model_v4 | GH33 | 1 | 440 | 1 | 670 | 0.5301 |
0.648 |
| AF-A0A510L0V3-F1-model_v4 | GH135 | 1 | 438 | 222 | 765 | 0.5263 |
0.6754 |
| AF-A0A222P7K1-F1-model_v4 | GH135 | 1 | 438 | 168 | 707 | 0.5159 |
0.6443 |
| A0A420XFX9 | GH33 | 1 | 438 | 999 | 1498 | 0.4962 |
0.7726 |
| A0A6G8J7C0 | CBM40 , GH33 | 1 | 438 | 1015 | 1610 | 0.4938 |
0.7816 |
| A0A3S4GXM1 | CBM40 , GH33 | 1 | 440 | 982 | 1643 | 0.4899 |
0.776 |
| WBT40087.1 | GT4 | 7 | 438 | 434 | 1347 | 0.4895 |
0.7529 |
| A0A011P926 | CBM40 , GH33 | 1 | 438 | 1016 | 1627 | 0.4883 |
0.7748 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A510K0F4 | GH135 | 1 | 438 | 223 | 765 | 0.5345 |
0.6861 |
| J7GU76 | GH33 | 1 | 440 | 1 | 670 | 0.5307 |
0.6491 |
| A0A222P7K1 | GH135 | 1 | 438 | 168 | 707 | 0.5159 |
0.6443 |
| A0A7G9GW96 | GH33 | 2 | 440 | 28 | 715 | 0.5132 |
0.6433 |
| A0A420XFX9 | GH33 | 1 | 438 | 999 | 1498 | 0.4962 |
0.7726 |
| A0A6G8J7C0 | CBM40 , GH33 | 1 | 438 | 1015 | 1610 | 0.4938 |
0.7816 |
| A0A3S4GXM1 | CBM40 , GH33 | 1 | 440 | 982 | 1643 | 0.4899 |
0.776 |
| WBT40087.1 | GT4 | 7 | 438 | 434 | 1347 | 0.4895 |
0.7529 |
| A0A011P926 | CBM40 , GH33 | 1 | 438 | 1016 | 1627 | 0.4883 |
0.7748 |
| QPB43404.1 | CBM40 , GH33 | 1 | 439 | 1023 | 1538 | 0.4851 |
0.7587 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1uyn-assembly1.cif.gz_X | 117 | 438 | 1 | 279 | 0.7369 |
0.9102 |
| 3slo-assembly1.cif.gz_A | 61 | 438 | 1 | 306 | 0.7361 |
0.8776 |
| 3slt-assembly1.cif.gz_A | 60 | 438 | 1 | 305 | 0.7352 |
0.8777 |
| 3slj-assembly1.cif.gz_A | 60 | 438 | 1 | 305 | 0.7346 |
0.8772 |
| 1uyo-assembly1.cif.gz_X | 116 | 438 | 1 | 277 | 0.7335 |
0.9085 |
| 8bo2-assembly1.cif.gz_P | 88 | 438 | 1 | 302 | 0.7303 |
0.8758 |
| 3aeh-assembly2.cif.gz_B | 55 | 440 | 1 | 277 | 0.7284 |
0.9024 |
| 4mee-assembly1.cif.gz_A | 89 | 438 | 1 | 303 | 0.7219 |
0.8637 |
| 2qom-assembly1.cif.gz_A | 140 | 439 | 1 | 265 | 0.6979 |
0.8791 |
| 2qom-assembly2.cif.gz_B | 140 | 439 | 1 | 269 | 0.6923 |
0.8676 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P77286-F1-model_v4 | 1 | 438 | 1 | 466 | 0.7464 |
0.7886 |
| AF-P14283-F1-model_v4 | 1 | 438 | 461 | 910 | 0.6225 |
0.8465 |
| AF-P33924-F1-model_v4 | 1 | 438 | 415 | 863 | 0.6165 |
0.824 |
| AF-Q03035-F1-model_v4 | 1 | 438 | 460 | 916 | 0.6129 |
0.8354 |
| AF-P24328-F1-model_v4 | 1 | 438 | 457 | 922 | 0.6092 |
0.8322 |
| AF-Q9XD84-F1-model_v4 | 1 | 438 | 498 | 989 | 0.6021 |
0.8403 |
| AF-P76017-F1-model_v4 | 1 | 438 | 486 | 955 | 0.5874 |
0.8111 |
| AF-Q6B6R8-F1-model_v4 | 2 | 438 | 212 | 646 | 0.5848 |
0.7098 |
| AF-Q45340-F1-model_v4 | 1 | 439 | 558 | 1010 | 0.5794 |
0.8117 |
| AF-Q88QS0-F1-model_v4 | 26 | 440 | 33 | 629 | 0.5791 |
0.7263 |