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PROTEIN: HRGMv2_1962_2_123

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Protein File & Metadata
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Source:
HRGMv2_1962_2_123.pdb
Genome ID:
HRGMv2_1962
Protein ID:
HRGMv2_1962_2_123

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Detailed structural information will appear here after analysis...

Protein Sequence 
MIASDCTERN   ERKMKKMKKI   ITTVLLAFSL   LACKGKEQAA   APKAEGLKGS   IVVQAEDTWK 60
PYYEAAIKRV   KEKNPDADIQ   LKVIGSFDHL   EIIDKTDASN   KDVADVFALP   LDKLESLNSK 120
SVLASFDAKA   LADKIGGFKD   FDNGLGGQLK   KDGNYVAFPM   NIETLAVGIN   KKNAAAQGID 180
VTKDIDLAKL   SPDVAMVPVF   NAWYGVAITN   AFDVELLGKD   GDKFFSDLTK   NWEELTPDQQ 240
KMFEGLFNYW   KASHAKKLPM   FDEKAVDGYI   SDQFNTGKTG   AVRIVGPWDA   NPMVEALGDD 300
FDVIGLNHAT   WEGKPLKHWK   SGWALGINAR   NEEDKDKIAL   SEAVIAELMN   PKYAADMYKI 360
TGKIMPNVSK   EEYEKMDKLS   PIDKKVLASI   LESYDVAVSR   PLFEEWGQVW   DTWKNSIVSW 420
ESKNPKTPQD   AYKEVQASFK   ALLTNLGQ 448
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F002-F1-model_v4 4 447 31 439 0.7492 0.8264
AF-A0A133CPC5-F1-model_v4 43 448 30 423 0.7432 0.8343
AF-A0A133CKQ7-F1-model_v4 47 448 38 417 0.7429 0.8569
AF-P59214-F1-model_v4 45 448 37 423 0.7394 0.8427
AF-P76042-F1-model_v4 42 448 22 429 0.7284 0.8014
AF-A0A0H3GKJ8-F1-model_v4 39 448 18 404 0.7258 0.8192
AF-K0EWS9-F1-model_v4 16 448 37 463 0.7223 0.7861
AF-Q2G1E9-F1-model_v4 1 448 19 418 0.718 0.7979
AF-A0A132ZDH4-F1-model_v4 43 445 27 427 0.7177 0.7979
AF-A0A133CDW9-F1-model_v4 46 448 42 442 0.7174 0.8115
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 47 448 34 413 0.7476 0.8604
A0A0M1Q963 GH43_11 21 448 37 491 0.6454 0.7315
A0A9Q8PNJ5 GH4 46 448 469 865 0.5591 0.8285
AF-A0A7U1BNH7-F1-model_v4 GH10 46 448 28 734 0.5524 0.7652
AF-A0A1B0VLS2-F1-model_v4 CBM0 45 448 543 947 0.4971 0.7509
UJP10085.1 GH154 1 424 266 1167 0.4224 0.6784
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 47 448 34 413 0.7476 0.8604
K8E205 GH32 48 425 35 344 0.6469 0.8195
A0A0M1Q963 GH43_11 21 448 37 491 0.6454 0.7315
A0A9Q8PNJ5 GH4 46 448 469 865 0.5591 0.8285
A0A7U1BNH7 GH10 46 448 28 734 0.5524 0.7652
A0A242CSU4 CBM35 46 448 573 967 0.4936 0.7673
UJP10085.1 GH154 1 424 266 1167 0.4224 0.6784
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2xd3-assembly1.cif.gz_A 50 447 1 375 0.7642 0.8475
5mkb-assembly1.cif.gz_A 46 447 1 373 0.7599 0.8458
7xmn-assembly1.cif.gz_A-2 48 446 1 367 0.7596 0.8495
5tu0-assembly1.cif.gz_A 45 448 1 381 0.759 0.841
3jzj-assembly1.cif.gz_A 46 448 1 388 0.7508 0.8225
5f7v-assembly1.cif.gz_A 47 448 1 387 0.7491 0.8233
3uor-assembly2.cif.gz_B 49 448 1 388 0.7486 0.8268
2zyk-assembly3.cif.gz_C 48 448 2 377 0.7482 0.8351
1mdp-assembly2.cif.gz_2 49 447 4 363 0.7468 0.8473
1urs-assembly1.cif.gz_A 49 445 1 366 0.7466 0.8387
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O07009-F1-model_v4 23 448 29 416 0.7466 0.8476
AF-Q8FVS7-F1-model_v4 46 448 23 411 0.744 0.8343
AF-O06989-F1-model_v4 46 448 33 416 0.7437 0.8478
AF-Q578M8-F1-model_v4 46 448 23 411 0.7432 0.8332
AF-Q2YKZ9-F1-model_v4 46 448 23 411 0.7415 0.8313
AF-P59214-F1-model_v4 45 448 37 423 0.7394 0.8427
AF-P59213-F1-model_v4 45 448 37 423 0.7343 0.8374
AF-P76042-F1-model_v4 42 448 22 429 0.7284 0.8014
AF-Q7LYW7-F1-model_v4 38 448 34 448 0.7211 0.804
AF-A0QXD9-F1-model_v4 8 448 42 477 0.7186 0.7792
Download Full SwissProt Results