PROTEIN: HRGMv2_1945_15_11
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_1945_15_11.pdb
Genome ID:
Protein ID:
HRGMv2_1945_15_11
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSKRTVYLIF SLAVAAFVVF AVLMEHAGSG PARVRVESKQ ESGYGFVDRE AVRKYVEEKL 60 EGVPSDSVPG KLLPLEQHIA RSPYVERAMV YRRPSGEVRV DLWEEQPSFR LVTDTGNYYV 120 SRKDRLMPVR AGVGVDVPLV SGQVDREAFP KVREVIARVE QDDFFSAQTV GIRVSRRQKS 180 GKAVYDFALD TRVGLQVVLG EADELDLKFE NFGIIYAYLY SAGKTDAYKV VNLEFGNYVI 240 CKKK 244
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F6M1-F1-model_v4 | 26 | 244 | 34 | 231 | 0.6794 |
0.8475 |
| AF-G3XDA7-F1-model_v4 | 22 | 244 | 69 | 272 | 0.6148 |
0.8039 |
| AF-A0A0H3GN94-F1-model_v4 | 11 | 244 | 46 | 267 | 0.614 |
0.7463 |
| AF-Q7CR81-F1-model_v4 | 15 | 244 | 41 | 257 | 0.613 |
0.7492 |
| AF-P06136-F1-model_v4 | 15 | 244 | 41 | 256 | 0.6118 |
0.7501 |
| AF-Q32JZ9-F1-model_v4 | 19 | 244 | 45 | 256 | 0.6094 |
0.7593 |
| AF-P45067-F1-model_v4 | 26 | 244 | 51 | 251 | 0.5904 |
0.7461 |
| AF-K0ELF0-F1-model_v4 | 23 | 239 | 51 | 248 | 0.5407 |
0.6833 |
| AF-P9WNA1-F1-model_v4 | 22 | 240 | 117 | 314 | 0.4958 |
0.6867 |
| AF-A0A132Z7A8-F1-model_v4 | 1 | 243 | 74 | 334 | 0.489 |
0.6265 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8hhh-assembly1.cif.gz_Q | 2 | 244 | 4 | 236 | 0.7047 |
0.7634 |
| 6h9o-assembly2.cif.gz_C | 32 | 244 | 1 | 192 | 0.6984 |
0.8134 |
| 2vh1-assembly1.cif.gz_A | 32 | 244 | 1 | 199 | 0.6917 |
0.7962 |
| 2vh2-assembly2.cif.gz_B | 30 | 244 | 3 | 196 | 0.6899 |
0.8087 |
| 2vh1-assembly2.cif.gz_B | 32 | 244 | 1 | 195 | 0.6856 |
0.7933 |
| 6h9o-assembly1.cif.gz_A | 32 | 244 | 1 | 192 | 0.6799 |
0.7944 |
| 2vh2-assembly1.cif.gz_A | 30 | 244 | 1 | 197 | 0.6783 |
0.7859 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O30990-F1-model_v4 | 45 | 244 | 1 | 185 | 0.7025 |
0.8716 |
| AF-Q2Y642-F1-model_v4 | 26 | 244 | 34 | 235 | 0.6946 |
0.8423 |
| AF-Q0VRZ9-F1-model_v4 | 1 | 244 | 24 | 254 | 0.6888 |
0.7766 |
| AF-Q9K0X9-F1-model_v4 | 26 | 244 | 27 | 224 | 0.6866 |
0.8456 |
| AF-Q5F6M1-F1-model_v4 | 26 | 244 | 34 | 231 | 0.6794 |
0.8475 |
| AF-Q68XB9-F1-model_v4 | 23 | 244 | 65 | 266 | 0.6663 |
0.8501 |
| AF-Q1RHX3-F1-model_v4 | 22 | 244 | 66 | 267 | 0.6615 |
0.8436 |
| AF-F8CLT8-F1-model_v4 | 23 | 244 | 55 | 273 | 0.661 |
0.8057 |
| AF-Q9ZDS5-F1-model_v4 | 22 | 244 | 66 | 267 | 0.6607 |
0.8443 |
| AF-Q5E2Q2-F1-model_v4 | 22 | 244 | 43 | 246 | 0.6598 |
0.8216 |