PROTEIN: HRGMv2_1944_1_99
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Protein File & Metadata
Source:
HRGMv2_1944_1_99.pdb
Genome ID:
Protein ID:
HRGMv2_1944_1_99
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Protein Sequence
MKINLKGLEY FLLAIGIFTD VRIEPLIMLL AVLLVYSRGG NITWNRSILL GFGVLTTWSL 60 LAILMVGYSP WKFVQQFILL FYFFTAYHIL FNNNRDHIND IFRMYLRVAF VLCILGLLQF 120 AVLYLTGFDI FFMFKEREHV LLETGNITRI SSICAEPGNF SRVITPALGY YLFKDHRDRK 180 EWTRFLVILL TFFLTFSTMS YVIFFAMVGY KYLIIKKNVI VRAAATVLSC IVAVFIFNII 240 TATEGKIGQG EDRTLLSDVS IKIRDVVGGF KDFTPETIET LNLSSYATLM NVWVALNAPN 300 RVFGTGLGTH EQNYQNVYYS DSEFYGLNMQ EGYALANRLY SELGLAGIFL FVWFLYKCHN 360 KKNIINICVF FALLTVTFRG GHYTRYGTIF FLFLYYYTST YVQKGLRMAE GHPDEPHSYK 420 TAALPEKTNA PKQTTP 436
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G288-F1-model_v4 | 2 | 412 | 6 | 412 | 0.6844 |
0.7316 |
| AF-P71238-F1-model_v4 | 1 | 423 | 4 | 405 | 0.673 |
0.7253 |
| AF-X8F0V5-F1-model_v4 | 2 | 421 | 38 | 468 | 0.6088 |
0.6793 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 1 | 436 | 11 | 752 | 0.5506 |
0.7022 |
| AF-B8DZR6-F1-model_v4 | GT9 | 2 | 420 | 40 | 547 | 0.5366 |
0.7192 |
| UII34295.1 | GT4 | 2 | 412 | 14 | 422 | 0.5314 |
0.7274 |
| USX27957.1 | GT9 | 3 | 415 | 15 | 446 | 0.5068 |
0.6805 |
| AF-A0A6S6I134-F1-model_v4 | GT2 | 1 | 432 | 8 | 913 | 0.4894 |
0.6864 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 5 | 407 | 22 | 418 | 0.4657 |
0.6758 |
| AF-M4X4V7-F1-model_v4 | GH39 | 4 | 408 | 21 | 419 | 0.4641 |
0.6716 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 4 | 407 | 21 | 418 | 0.464 |
0.6718 |
| AF-A0A5B7R2V6-F1-model_v4 | GH5_39 | 4 | 414 | 384 | 796 | 0.4446 |
0.6119 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 1 | 436 | 11 | 752 | 0.5506 |
0.7022 |
| B5YD26 | GT9 | 2 | 420 | 40 | 547 | 0.5386 |
0.7218 |
| UII34295.1 | GT4 | 2 | 412 | 14 | 422 | 0.5314 |
0.7274 |
| D5MJ04 | GT9 | 2 | 417 | 24 | 564 | 0.5215 |
0.7013 |
| USX27957.1 | GT9 | 3 | 415 | 15 | 446 | 0.5068 |
0.6805 |
| A0A6S6I134 | GT2 | 1 | 432 | 8 | 913 | 0.4894 |
0.6864 |
| M4X4V7 | GH39 | 4 | 408 | 21 | 419 | 0.4641 |
0.6716 |
| A0A5B7R2V6 | GH5_39 | 4 | 414 | 384 | 796 | 0.4446 |
0.6119 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 423 | 4 | 405 | 0.673 |
0.7253 |
| AF-Q02729-F1-model_v4 | 1 | 413 | 1 | 409 | 0.6241 |
0.6846 |