PROTEIN: HRGMv2_1944_1_98
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Protein File & Metadata
Source:
HRGMv2_1944_1_98.pdb
Genome ID:
Protein ID:
HRGMv2_1944_1_98
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Protein Sequence
MSGTWHKILT SAPHRRIFFL ALRRLNLIKT LWFNFRVLPL RQALRIPIWI YGRISFVSLR 60 GRVEIRAKHI SPAMIHLGFP EDMYFNPKEG GVINNDGKII FNGPIFIACG YNLRTYDQGS 120 ISFGEGIKLG AKLNLVSHSS GIRIGDHSRI AFESVIMDSG FHFIKSLNDP LVHNVDAEVV 180 IGNYNWISNR TVVNKGTRTP DNLIVASGSL LNKDYTKDIP EYSLIGGTPA KFIKGNISRI 240 WNGQTEVKLR EYFTQSGAQT LEVDDSTPLK 270
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P9CFB7-F1-model_v4 | GT4 | 38 | 250 | 371 | 562 | 0.4543 |
0.8525 |
| AF-A0A248LHU4-F1-model_v4 | GT2 | 18 | 263 | 372 | 550 | 0.4232 |
0.8371 |
| AF-C1D4M7-F1-model_v4 | GT2 | 17 | 263 | 372 | 550 | 0.4229 |
0.8364 |
| D0I3Z1 | CE4 , GT4 | 1 | 250 | 491 | 779 | 0.4185 |
0.6729 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P9CFB7 | GT4 | 38 | 250 | 371 | 562 | 0.4543 |
0.8525 |
| C1D4M7 | GT2 | 17 | 263 | 372 | 550 | 0.4229 |
0.8364 |
| D0I3Z1 | CE4 , GT4 | 1 | 250 | 491 | 779 | 0.4185 |
0.6729 |
| A0A0S4FQN4 | GT2 | 35 | 270 | 267 | 485 | 0.3896 |
0.7855 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2wlc-assembly1.cif.gz_A | 31 | 270 | 1 | 207 | 0.7293 |
0.8499 |
| 3jqy-assembly1.cif.gz_C | 27 | 270 | 1 | 209 | 0.7132 |
0.8344 |
| 3jqy-assembly1.cif.gz_A | 26 | 270 | 9 | 216 | 0.6897 |
0.8412 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A1ADJ6-F1-model_v4 | 26 | 270 | 89 | 297 | 0.609 |
0.8397 |