PROTEIN: HRGMv2_1915_42_7
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Protein File & Metadata
Source:
HRGMv2_1915_42_7.pdb
Genome ID:
Protein ID:
HRGMv2_1915_42_7
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Protein Sequence
MRKYRKLLID IAIVLALTIL LMFPYLTKSF LAIEHDTFFH VSRIEQYAKA LQHGQILPAI 60 YPYENGGFGY GSPLFYSDLF LLLPAILHNL GLVLVDSYKL TVFLASFFSG ITMYMLASKF 120 TSKSSIRLLA AAAYLFINYH ITDIYVRGAL GEVFALVGIP LILSGLYEIF ETNQKYSFSY 180 LIGLVITVLS HNLSFLLCFI LVIIICIIYL SKCSFDRYKL LVSESMLACL LTAFYTFPMI 240 EQLKSQQFYL NYYASSSALE NHAMAFWQFF ANQTVFGLSG NQYKASNAMV VNIGLFLSIA 300 PISYLFLSKK EKQPFITSML VLGWICMLLP AQIFPWKYMS FVRVLQFPWR LNMLALPLLC 360 VPAVIGIENL THKLRYVPIC LILLLSLEGI YHLYPATKRT FIMQHNTTWQ EVTNGKLIDP 420 YYSAQYMRVE LAGGDYLPYY SPDFRSYTRT IQTTSAETVT TGEWIDYGRY RFTITNPQTV 480 VLPITYYKGY IIHNIDTAEV LETTLSKNGL VSVTIPSAGT YVCEYQSTNI RIVSIWISIL 540 TCMISIGYII YHRRKKDIL 559
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CFT8-F1-model_v4 | 1 | 557 | 1 | 536 | 0.8439 |
0.8815 |
| AF-A0A5P3FT45-F1-model_v4 | 1 | 559 | 2 | 540 | 0.8316 |
0.8634 |
| AF-A0A133CH43-F1-model_v4 | 1 | 556 | 1 | 544 | 0.8237 |
0.8504 |
| AF-A0A1S8IUA0-F1-model_v4 | 1 | 559 | 9 | 566 | 0.7723 |
0.7953 |
| AF-A0A133CH37-F1-model_v4 | 96 | 559 | 1 | 451 | 0.721 |
0.8258 |
| AF-K0EVD5-F1-model_v4 | 1 | 559 | 6 | 725 | 0.6953 |
0.8055 |
| AF-K0EUF9-F1-model_v4 | 3 | 559 | 1 | 722 | 0.692 |
0.8014 |
| AF-K0EMA3-F1-model_v4 | 1 | 559 | 37 | 755 | 0.6917 |
0.808 |
| AF-K0EV20-F1-model_v4 | 14 | 559 | 1 | 706 | 0.686 |
0.8013 |
| AF-A0A132Z547-F1-model_v4 | 1 | 559 | 6 | 870 | 0.6611 |
0.8177 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZH0-F1-model_v4 | GT2 | 1 | 559 | 2 | 596 | 0.7199 |
0.8472 |
| UYZ58515.1 | GT83 | 1 | 446 | 14 | 455 | 0.6133 |
0.7416 |
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 2 | 400 | 1 | 396 | 0.6133 |
0.7445 |
| A0A8D5JSU7 | GT83 | 1 | 458 | 3 | 460 | 0.6029 |
0.698 |
| UTW03109.1 | GT83 | 3 | 512 | 7 | 507 | 0.602 |
0.6536 |
| AF-A0A6G6YWR9-F1-model_v4 | GT39 | 1 | 401 | 13 | 418 | 0.5973 |
0.7349 |
| AF-A0A7S7TGL6-F1-model_v4 | GT39 | 1 | 401 | 12 | 418 | 0.597 |
0.7347 |
| Q2RN42 | GT83 | 6 | 523 | 25 | 534 | 0.5951 |
0.6518 |
| AF-A6U781-F1-model_v4 | GT83 | 2 | 463 | 4 | 464 | 0.5934 |
0.6847 |
| AF-C3M8P7-F1-model_v4 | GT83 | 2 | 463 | 4 | 463 | 0.5914 |
0.6842 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZH0 | GT2 | 1 | 559 | 2 | 596 | 0.7199 |
0.8472 |
| UYZ58515.1 | GT83 | 1 | 446 | 14 | 455 | 0.6133 |
0.7416 |
| A0A1S6H5E4 | GT39 | 2 | 400 | 1 | 396 | 0.6133 |
0.7445 |
| F2LXI8 | GT83 | 1 | 471 | 5 | 411 | 0.6092 |
0.7347 |
| A0A840CAN4 | GT83 | 1 | 509 | 4 | 445 | 0.6047 |
0.7168 |
| A0A8D5JSU7 | GT83 | 1 | 458 | 3 | 460 | 0.6029 |
0.698 |
| UTW03109.1 | GT83 | 3 | 512 | 7 | 507 | 0.602 |
0.6536 |
| L0GV37 | GT83 | 1 | 521 | 7 | 498 | 0.5962 |
0.653 |
| UVH60577.1 | GT83 | 1 | 510 | 1 | 514 | 0.5954 |
0.6413 |
| Q2RN42 | GT83 | 6 | 523 | 25 | 534 | 0.5951 |
0.6518 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8if8-assembly1.cif.gz_B | 1 | 485 | 71 | 560 | 0.5955 |
0.7261 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42377-F1-model_v4 | 1 | 559 | 12 | 610 | 0.8256 |
0.8757 |
| AF-O31582-F1-model_v4 | 1 | 556 | 1 | 859 | 0.6525 |
0.8013 |
| AF-P9WN02-F1-model_v4 | 1 | 522 | 90 | 642 | 0.588 |
0.6819 |
| AF-Q8VDB2-F1-model_v4 | 1 | 447 | 2 | 420 | 0.5691 |
0.7106 |
| AF-Q9BV10-F1-model_v4 | 2 | 447 | 2 | 421 | 0.5671 |
0.7076 |
| AF-A8MR93-F1-model_v4 | 1 | 447 | 3 | 426 | 0.5585 |
0.6958 |
| AF-Q8U4D2-F1-model_v4 | 2 | 518 | 20 | 952 | 0.5051 |
0.6883 |