PROTEIN: HRGMv2_1902_1_2325
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Protein File & Metadata
Source:
HRGMv2_1902_1_2325.pdb
Genome ID:
Protein ID:
HRGMv2_1902_1_2325
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Protein Sequence
MKKALIFDTY DDYNIRIQYI KSALERNGYE TMIYFADFDH VKKQYYTKKR EDVHYIHVSE 60 YQKNLSYARI ASHMKFAKAC VEVAEKHTDV SLIYIMVPPN SMVKQFALYK RKHENVKIWF 120 DVLDMWPESL PVSDKIKKLG ACIFNQWAKL RNRYLNDCDL VSFECNLFRD TLKQFVDAKK 180 QTTIYLSQDN HMINSYDSFK EQINFLYCGS INHIIDIDKI VSILKDIMRL KKVHLDIIGD 240 GENKDAFLQQ LDIHHIPYTY HGLVYDEEKK RNIYRHCHFG FNIMKDSVYV GLTMKSLDYL 300 SYGLPMINNI KGDSLSLVES EKIGLNVNDA LIQNITSLSE EEYFMMKENV KKTFLAYFDR 360 HCIDQQLDQN IKELED 376
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FAE0-F1-model_v4 | 2 | 376 | 1 | 388 | 0.805 |
0.8411 |
| AF-Q8ZNR1-F1-model_v4 | 2 | 373 | 1 | 407 | 0.802 |
0.8608 |
| AF-Q2G1K0-F1-model_v4 | 2 | 374 | 1 | 369 | 0.8015 |
0.8307 |
| AF-P32057-F1-model_v4 | 2 | 373 | 1 | 407 | 0.7966 |
0.8563 |
| AF-A0A0H3GSH7-F1-model_v4 | 1 | 376 | 3 | 381 | 0.792 |
0.8193 |
| AF-Q7CQX6-F1-model_v4 | 1 | 376 | 1 | 377 | 0.7862 |
0.8107 |
| AF-Q06994-F1-model_v4 | 2 | 376 | 1 | 358 | 0.7855 |
0.8265 |
| AF-Q5F602-F1-model_v4 | 2 | 375 | 1 | 376 | 0.7829 |
0.8107 |
| AF-P27127-F1-model_v4 | 2 | 376 | 1 | 356 | 0.7828 |
0.8284 |
| AF-Q9HZ80-F1-model_v4 | 2 | 376 | 1 | 412 | 0.7817 |
0.8414 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Q6RXD0 | GT0 | 1 | 375 | 4 | 374 | 0.9439 |
0.9631 |
| AF-A0A0U2WT66-F1-model_v4 | GT0 | 2 | 376 | 1 | 379 | 0.9368 |
0.9543 |
| UNT96867.1 | GT4 | 1 | 373 | 3 | 374 | 0.9252 |
0.9439 |
| AF-E6UKU0-F1-model_v4 | GT0 | 2 | 376 | 1 | 367 | 0.9177 |
0.9432 |
| AF-A0A4V0HA57-F1-model_v4 | GT0 | 2 | 376 | 1 | 370 | 0.912 |
0.9344 |
| A0A8T8I9A9 | GT0 | 2 | 376 | 1 | 374 | 0.9109 |
0.9295 |
| AF-A0A0A7P6I9-F1-model_v4 | GT0 | 2 | 376 | 1 | 371 | 0.9074 |
0.9291 |
| AF-A0A3G9JX09-F1-model_v4 | GT0 | 2 | 376 | 1 | 367 | 0.9072 |
0.9386 |
| C6IU66 | GT0 | 1 | 374 | 2 | 371 | 0.9034 |
0.9268 |
| AF-A0A1P8VRJ6-F1-model_v4 | GT0 | 2 | 376 | 1 | 371 | 0.9031 |
0.9253 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UNT96867.1 | GT4 | 1 | 373 | 3 | 374 | 0.9252 |
0.9439 |
| QTO62823.1 | GT4 | 1 | 376 | 5 | 384 | 0.8983 |
0.9226 |
| AVF76130.1 | GT4 | 2 | 376 | 1 | 374 | 0.8898 |
0.9106 |
| QUN06895.1 | GT4 | 2 | 376 | 1 | 368 | 0.8848 |
0.9093 |
| QWV91951.1 | GT4 | 2 | 376 | 1 | 409 | 0.8504 |
0.9057 |
| A0A125MEQ4 | GT4 | 1 | 376 | 1 | 391 | 0.8482 |
0.8835 |
| A0A7L8AHM0 | GT4 | 1 | 376 | 1 | 394 | 0.8476 |
0.8855 |
| M1PPL5 | GT4 | 1 | 372 | 8 | 394 | 0.8464 |
0.8912 |
| Q65SF9 | GT4 | 1 | 375 | 4 | 393 | 0.842 |
0.8816 |
| D5UJF0 | GT4 | 1 | 376 | 6 | 406 | 0.8403 |
0.9009 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5n7z-assembly1.cif.gz_A | 2 | 375 | 1 | 357 | 0.7845 |
0.8254 |
| 3oka-assembly1.cif.gz_A | 1 | 376 | 1 | 378 | 0.7714 |
0.7947 |
| 7qsg-assembly1.cif.gz_A | 1 | 376 | 3 | 377 | 0.7587 |
0.7858 |
| 6kih-assembly2.cif.gz_B | 1 | 376 | 1 | 397 | 0.7434 |
0.7897 |
| 8ila-assembly1.cif.gz_A | 1 | 376 | 1 | 426 | 0.7422 |
0.8107 |
| 5ze7-assembly1.cif.gz_B | 1 | 376 | 2 | 353 | 0.7396 |
0.7888 |
| 3mbo-assembly4.cif.gz_G | 1 | 376 | 1 | 363 | 0.7294 |
0.7689 |
| 3mbo-assembly1.cif.gz_B | 1 | 376 | 1 | 367 | 0.728 |
0.7647 |
| 4xsp-assembly1.cif.gz_A | 1 | 374 | 1 | 365 | 0.7273 |
0.7607 |
| 2jjm-assembly1.cif.gz_B | 1 | 375 | 1 | 359 | 0.7243 |
0.7668 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P32057-F1-model_v4 | 2 | 373 | 1 | 407 | 0.7966 |
0.8563 |
| AF-Q06994-F1-model_v4 | 2 | 376 | 1 | 358 | 0.7855 |
0.8265 |
| AF-P27127-F1-model_v4 | 2 | 376 | 1 | 356 | 0.7828 |
0.8284 |
| AF-Q0P9C7-F1-model_v4 | 1 | 374 | 1 | 365 | 0.7727 |
0.8055 |
| AF-Q8NNK8-F1-model_v4 | 1 | 376 | 3 | 381 | 0.7726 |
0.7979 |
| AF-Q8KIU8-F1-model_v4 | 1 | 376 | 1 | 396 | 0.7713 |
0.8188 |
| AF-Q0P9C9-F1-model_v4 | 2 | 376 | 1 | 374 | 0.7684 |
0.7942 |
| AF-Q58469-F1-model_v4 | 1 | 376 | 3 | 392 | 0.7651 |
0.8034 |
| AF-Q58577-F1-model_v4 | 1 | 376 | 2 | 351 | 0.7634 |
0.8151 |
| AF-Q48454-F1-model_v4 | 2 | 376 | 1 | 373 | 0.7597 |
0.7867 |