PROTEIN: HRGMv2_1878_27_34
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Protein File & Metadata
Source:
HRGMv2_1878_27_34.pdb
Genome ID:
Protein ID:
HRGMv2_1878_27_34
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Protein Sequence
MKRIPHQLME LNSTFIWHWP WFIQGVKSAK QHGFTGIILH QQELLSVLAT PSALSQKLNV 60 ENLIHQQNYA LQYLIRVDRY LAENNLSFWL QGEAAPDDDI IKRKFPELTF DEKSAPDFWH 120 HFYAAILHPL LHALPHLSGL ILSLTTPDFQ TTRWQQSLHD VWSLLRARGK KLILRDFIDN 180 SWPRQQLANI LAMLPNDVRA SVKATELDYH PGFANHPHIA TLPGHKKWIE YDLFGTGYGW 240 TALPCYLGDE ISGRLSWALS AAENEIEAIT SRVSWQWLPD SRVMDSANAI NLFGLTAANQ 300 AADAALPATF DRWAEHHQLG FRSLQDKHQL SAIVHASYDW LCKTPNLLGR RLHYQSQIPE 360 SIAQAQQLLH MDTRSANWLH AWQPLMPADD PALGKEQRER MALEKEASCF LASRTLQNLR 420 ELMPRITCQD DTLATLLAAW RSAEIYSQMF SHVAAAVTDV LWRDHYGANS LPADTLQKHQ 480 QRLLHYTDTL NRWLADPPAS GPLFLPLLLS PERLERFARS LSESL 525
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175W6S6-F1-model_v4 | 1 | 516 | 152 | 799 | 0.6263 |
0.7892 |
| AF-A0A0D2GQA5-F1-model_v4 | 1 | 517 | 157 | 801 | 0.6259 |
0.7881 |
| AF-A0A1C1CFA3-F1-model_v4 | 1 | 517 | 156 | 801 | 0.6255 |
0.7876 |
| AF-U7PJI3-F1-model_v4 | 1 | 516 | 163 | 813 | 0.6245 |
0.7916 |
| AF-A0A044TD52-F1-model_v4 | 1 | 525 | 77 | 571 | 0.5372 |
0.6057 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6G9RS19-F1-model_v4 | GH67 | 8 | 479 | 1 | 538 | 0.698 |
0.796 |
| AF-A0A2S1TZA1-F1-model_v4 | GH67 | 1 | 524 | 43 | 580 | 0.6882 |
0.7397 |
| AF-A0A4V1D297-F1-model_v4 | GH67 | 1 | 515 | 89 | 641 | 0.6746 |
0.7701 |
| AF-A0A380YIE7-F1-model_v4 | GH67 | 1 | 519 | 105 | 670 | 0.6729 |
0.7728 |
| A0A380YLY4 | GH67 | 1 | 519 | 105 | 670 | 0.6718 |
0.7713 |
| AF-H9A0B2-F1-model_v4 | GH67 | 1 | 514 | 107 | 644 | 0.6708 |
0.7647 |
| AF-A0A5S9IR15-F1-model_v4 | GH0 | 1 | 525 | 46 | 716 | 0.6684 |
0.8274 |
| AF-A0A4P7VES4-F1-model_v4 | GH67 | 1 | 514 | 124 | 673 | 0.6625 |
0.7692 |
| AF-A0A2R3MSL1-F1-model_v4 | GH67 | 1 | 514 | 123 | 668 | 0.6623 |
0.7665 |
| AF-B3CES4-F1-model_v4 | GH67 | 1 | 514 | 126 | 676 | 0.6617 |
0.7694 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1D297 | GH67 | 1 | 515 | 89 | 641 | 0.6746 |
0.7701 |
| A0A380YLY4 | GH67 | 1 | 519 | 105 | 670 | 0.6718 |
0.7713 |
| A0A239QGK4 | GH67 | 1 | 482 | 91 | 608 | 0.6573 |
0.7758 |
| A0A7T4KU42 | GH67 | 1 | 482 | 109 | 648 | 0.6522 |
0.7903 |
| F9D511 | GH67 | 1 | 475 | 128 | 647 | 0.6479 |
0.7955 |
| A0A6H0KUB2 | GH67 | 1 | 515 | 140 | 721 | 0.6457 |
0.7691 |
| E6UGH1 | GH67 | 1 | 482 | 121 | 649 | 0.6452 |
0.7822 |
| A0A7T0RQE8 | GH67 | 1 | 510 | 156 | 709 | 0.6418 |
0.7666 |
| E4T1K8 | GH67 | 1 | 510 | 153 | 710 | 0.6408 |
0.7652 |
| A0A1H1YYT7 | GH67 | 1 | 482 | 108 | 640 | 0.6406 |
0.7721 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1h41-assembly1.cif.gz_A | 1 | 515 | 145 | 700 | 0.6503 |
0.7657 |
| 1h41-assembly1.cif.gz_B | 1 | 516 | 145 | 701 | 0.65 |
0.7645 |
| 1gql-assembly1.cif.gz_B | 1 | 513 | 145 | 700 | 0.6484 |
0.7655 |
| 6hzf-assembly2.cif.gz_B | 1 | 525 | 92 | 846 | 0.645 |
0.8036 |
| 6hze-assembly2.cif.gz_B | 1 | 525 | 98 | 854 | 0.6422 |
0.8024 |
| 6hzf-assembly1.cif.gz_A | 1 | 525 | 101 | 858 | 0.6416 |
0.8034 |
| 6hze-assembly1.cif.gz_A | 1 | 525 | 100 | 857 | 0.6409 |
0.8021 |
| 1l8n-assembly1.cif.gz_A-2 | 1 | 482 | 134 | 671 | 0.6372 |
0.7833 |
| 1mqq-assembly1.cif.gz_A-2 | 1 | 482 | 136 | 675 | 0.6363 |
0.7842 |
| 1k9e-assembly1.cif.gz_A | 1 | 482 | 136 | 671 | 0.6357 |
0.7815 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B3PC73-F1-model_v4 | 1 | 516 | 169 | 732 | 0.6435 |
0.7696 |
| AF-P96105-F1-model_v4 | 1 | 482 | 136 | 674 | 0.6376 |
0.7855 |
| AF-Q09LY5-F1-model_v4 | 1 | 482 | 139 | 679 | 0.635 |
0.7843 |
| AF-B8NGU1-F1-model_v4 | 1 | 516 | 157 | 797 | 0.629 |
0.7918 |
| AF-A2R3X3-F1-model_v4 | 1 | 516 | 158 | 799 | 0.6279 |
0.7912 |
| AF-Q0CJP9-F1-model_v4 | 1 | 517 | 159 | 799 | 0.6275 |
0.7892 |
| AF-O42814-F1-model_v4 | 1 | 516 | 158 | 799 | 0.6274 |
0.7906 |
| AF-A1DD80-F1-model_v4 | 1 | 516 | 158 | 798 | 0.6273 |
0.79 |
| AF-Q96WX9-F1-model_v4 | 1 | 517 | 158 | 799 | 0.6273 |
0.789 |
| AF-A1CC12-F1-model_v4 | 1 | 517 | 158 | 798 | 0.627 |
0.7884 |