PROTEIN: HRGMv2_1878_1_252
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Protein File & Metadata
Source:
HRGMv2_1878_1_252.pdb
Genome ID:
Protein ID:
HRGMv2_1878_1_252
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Protein Sequence
MSRSIRICSY LLLPLIYLLV NVKIAQLGES FPITIVTFLP VLLLLFVEKI SVKKLLIALG 60 LGAGLTLFNY IFGQSLDASK YVTSTMLFVY IVIIIGMVWS IRFKTISPHN YRKILRFFYL 120 VIGIIVILAA MEMAQIILTG GSSLMEIISK YLIYSNSYVL NFIKFGGKRT TALYFEPAFF 180 ALALISIWLS IKQFGIKTPK SDAMILAGIV LSGSFSGVMT FILFYLLEWA FQYLNKEAIK 240 KKLPLAIISL SVFLVGVVFA FPYISERLGD LGTEGSSSYY RIIGPLVMVG YSLTHIDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LIIYFSWFAV LLTAWYLFKV FKMTINAFGD 360 NQNFRVQLYL FTPVSLFFTG SIFSPEYAFL IVCPFILRKA LNITRS 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 4 | 405 | 4 | 405 | 0.9844 |
0.9964 |
| AF-H9L488-F1-model_v4 | 5 | 404 | 5 | 404 | 0.982 |
0.9976 |
| AF-Q9I1M9-F1-model_v4 | 5 | 406 | 43 | 453 | 0.6677 |
0.7492 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B5YD26-F1-model_v4 | GT9 | 2 | 406 | 39 | 584 | 0.5677 |
0.7547 |
| AF-B8DZR6-F1-model_v4 | GT9 | 2 | 406 | 39 | 584 | 0.566 |
0.7525 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 3 | 405 | 21 | 447 | 0.5504 |
0.7255 |
| UII34295.1 | GT4 | 1 | 406 | 7 | 419 | 0.5466 |
0.7254 |
| AF-E6U9X7-F1-model_v4 | GT0 | 1 | 406 | 1 | 423 | 0.5435 |
0.7259 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B5YD26 | GT9 | 2 | 406 | 39 | 584 | 0.5677 |
0.7547 |
| A0A517MXC4 | GT26 | 3 | 405 | 21 | 447 | 0.5504 |
0.7255 |
| UII34295.1 | GT4 | 1 | 406 | 7 | 419 | 0.5466 |
0.7254 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 4 | 405 | 4 | 405 | 0.9844 |
0.9964 |
| AF-O32270-F1-model_v4 | 1 | 406 | 1 | 484 | 0.6423 |
0.718 |