PROTEIN: HRGMv2_1821_5_25
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Protein File & Metadata
Source:
HRGMv2_1821_5_25.pdb
Genome ID:
Protein ID:
HRGMv2_1821_5_25
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Protein Sequence
MLNIISEFKN KFNNIIDIIN RLENKVTSLD EKVLSVDAKV ENLNHKIASI DDKFDAVNEE 60 KSQLIPVEVD KADDKSAVIE QLVHNLQDRL EFVREEFMFE LRLKTGTLTD RDNKKEIETK 120 ILSSDKFDNL GWRKINIGCG HVQPEGYINV DARELPGVDV ICSASNLVFD DEALEEIYAA 180 HLIEHFTELE LTRVIFPHWY KKLKTGGVLK LVTPDADSMI KDYVSGTMSF DDLRKVTYGA 240 QDYEGDFHYI MFSVDSLKKM LTDAGFTTVT LVEDNRKNGL CREMEVLAIK 290
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0K0E7Y3-F1-model_v4 | 98 | 290 | 11 | 251 | 0.5069 |
0.7107 |
| AF-A0A175VRC5-F1-model_v4 | 113 | 290 | 77 | 363 | 0.4107 |
0.7214 |
| AF-Q9W232-F1-model_v4 | 91 | 290 | 346 | 609 | 0.358 |
0.6805 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6H2H5X3-F1-model_v4 | GT41 | 25 | 290 | 71 | 289 | 0.5082 |
0.6929 |
| AF-A0A6F8ZEE6-F1-model_v4 | GT2 | 123 | 290 | 101 | 441 | 0.4421 |
0.9203 |
| UDY35583.1 | GT2 , GT4 | 37 | 290 | 336 | 1224 | 0.44 |
0.8102 |
| AF-W0SK11-F1-model_v4 | GT2 | 10 | 290 | 27 | 502 | 0.4379 |
0.5771 |
| QWD97853.1 | GT32 | 126 | 290 | 82 | 455 | 0.4282 |
0.9067 |
| UUZ66970.1 | GT4 | 18 | 290 | 1 | 645 | 0.4169 |
0.6297 |
| AKZ65536.1 | GT2 | 129 | 290 | 1 | 177 | 0.3997 |
0.8514 |
| AF-Q8YZC2-F1-model_v4 | GT2 | 15 | 290 | 42 | 594 | 0.3952 |
0.5601 |
| AF-Q3MAH9-F1-model_v4 | GT2 | 104 | 290 | 130 | 594 | 0.3918 |
0.7966 |
| AF-A0A345P7Y8-F1-model_v4 | GT2 | 118 | 290 | 6 | 191 | 0.3884 |
0.8214 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6F8ZEE6 | GT2 | 123 | 290 | 101 | 441 | 0.4421 |
0.9203 |
| UDY35583.1 | GT2 , GT4 | 37 | 290 | 336 | 1224 | 0.44 |
0.8102 |
| W0SK11 | GT2 | 10 | 290 | 27 | 502 | 0.4379 |
0.5771 |
| QWD97853.1 | GT32 | 126 | 290 | 82 | 455 | 0.4282 |
0.9067 |
| UUZ66970.1 | GT4 | 18 | 290 | 1 | 645 | 0.4169 |
0.6297 |
| AKZ65536.1 | GT2 | 129 | 290 | 1 | 177 | 0.3997 |
0.8514 |
| A0A345P7Y8 | GT2 | 118 | 290 | 6 | 191 | 0.3884 |
0.8214 |
| A0A5Q0GER4 | GT2 | 104 | 290 | 129 | 594 | 0.3862 |
0.7817 |
| A0A974PY46 | GT41 | 7 | 290 | 389 | 826 | 0.3834 |
0.5819 |
| A0A0X8JN08 | GT4 | 120 | 290 | 3 | 260 | 0.3667 |
0.852 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3sm3-assembly1.cif.gz_A-2 | 130 | 290 | 13 | 209 | 0.5348 |
0.8101 |
| 7f1e-assembly2.cif.gz_B | 107 | 290 | 9 | 227 | 0.5165 |
0.7201 |
| 7ezg-assembly1.cif.gz_A | 107 | 290 | 46 | 270 | 0.4715 |
0.717 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8STN5-F1-model_v4 | 98 | 290 | 1 | 210 | 0.5422 |
0.6929 |
| AF-Q10224-F1-model_v4 | 102 | 290 | 1 | 227 | 0.5164 |
0.7007 |
| AF-A0A0D4BSP3-F1-model_v4 | 109 | 290 | 1 | 237 | 0.4975 |
0.7115 |