PROTEIN: HRGMv2_1821_46_4
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Protein File & Metadata
Source:
HRGMv2_1821_46_4.pdb
Genome ID:
Protein ID:
HRGMv2_1821_46_4
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Protein Sequence
MKKIGLRIDV DTWRGTKQGV PALLELFRRH AVRGSFFFSV GPDNMGRHLW RLVKPAFLMK 60 MLRSRAASLY GWDILLAGTA WPGKQMGRGL RHIIQDATRQ HEVGLHAWDH FAWQTWAGVW 120 PQDKLVEQIA RGTETLSEIL GHPVSCSAVA GWRADGRVIA AKQDFGFHYN SDCRGSGPFR 180 PMLPDGQIGT VQIPVTLPTW DEVVGREVSA EGYNDYILAK MLSSDDGAVY TVHAEVEGII 240 GYPDFDQLLA AAARHGIQFC PLSELLPDDL RTLPVGRVVR GEIPGREGWL GCQKLTEEAN 300
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GYK6-F1-model_v4 | 1 | 300 | 1 | 300 | 0.9219 |
0.9312 |
| AF-O52326-F1-model_v4 | 1 | 299 | 1 | 299 | 0.9156 |
0.9269 |
| AF-Q32DT2-F1-model_v4 | 1 | 298 | 1 | 295 | 0.915 |
0.9335 |
| AF-P76472-F1-model_v4 | 1 | 298 | 1 | 295 | 0.902 |
0.9196 |
| AF-Q9HY62-F1-model_v4 | 1 | 295 | 1 | 295 | 0.8914 |
0.9064 |
| AF-K0EZL7-F1-model_v4 | 1 | 274 | 19 | 284 | 0.6798 |
0.7644 |
| AF-Q9HW89-F1-model_v4 | 1 | 272 | 3 | 251 | 0.6665 |
0.7548 |
| AF-K0ENC6-F1-model_v4 | 1 | 271 | 37 | 293 | 0.6662 |
0.7797 |
| AF-A0A0D2GZ69-F1-model_v4 | 1 | 299 | 5 | 303 | 0.6656 |
0.6904 |
| AF-A0A0D2FHJ4-F1-model_v4 | 1 | 298 | 3 | 299 | 0.6653 |
0.6908 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2R4N133-F1-model_v4 | CE4 | 7 | 272 | 1 | 183 | 0.6955 |
0.8796 |
| AF-A0A221MI35-F1-model_v4 | CE4 | 1 | 267 | 10 | 191 | 0.6919 |
0.8985 |
| AF-A0A1X9MDA1-F1-model_v4 | CE4 | 1 | 266 | 6 | 186 | 0.6908 |
0.889 |
| AF-C9RC17-F1-model_v4 | CE4 | 1 | 269 | 11 | 204 | 0.6889 |
0.8739 |
| AF-A0A1B1RYX8-F1-model_v4 | CE4 | 1 | 266 | 10 | 191 | 0.6872 |
0.8946 |
| AF-I3TUY4-F1-model_v4 | CE4 | 1 | 299 | 9 | 288 | 0.6748 |
0.7247 |
| AF-A0A6F8Y7F8-F1-model_v4 | CE4 | 1 | 281 | 11 | 222 | 0.6746 |
0.8236 |
| AF-A0A160MHF2-F1-model_v4 | CE4 | 1 | 263 | 19 | 197 | 0.6685 |
0.8968 |
| AF-A0A1S2LPZ2-F1-model_v4 | CE4 | 1 | 263 | 20 | 199 | 0.6658 |
0.8935 |
| AF-A0A125Q0Q6-F1-model_v4 | CE4 | 1 | 298 | 29 | 312 | 0.6645 |
0.729 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q8CXA0 | CE4 | 1 | 272 | 6 | 196 | 0.7065 |
0.8941 |
| A0A068NVV2 | CE4 | 1 | 272 | 11 | 201 | 0.6973 |
0.8906 |
| UJP41575.1 | CE4 | 3 | 295 | 1 | 200 | 0.6965 |
0.8506 |
| G4RKA0 | CE4 | 1 | 273 | 1 | 204 | 0.6945 |
0.8442 |
| A0A0K1JPV0 | CE4 | 1 | 272 | 9 | 200 | 0.6924 |
0.878 |
| C9RC17 | CE4 | 1 | 269 | 11 | 204 | 0.6889 |
0.8739 |
| Q2W7D0 | CE4 | 1 | 275 | 3 | 248 | 0.6866 |
0.7739 |
| E4T6X2 | CE4 | 1 | 274 | 5 | 247 | 0.6826 |
0.7771 |
| F8IKB3 | CE4 | 1 | 267 | 18 | 205 | 0.6821 |
0.8931 |
| A0A1B1Z121 | CE4 | 1 | 264 | 13 | 193 | 0.6811 |
0.8943 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8t0j-assembly1.cif.gz_A | 1 | 297 | 1 | 270 | 0.907 |
0.9641 |
| 7y51-assembly1.cif.gz_A-2 | 1 | 267 | 1 | 186 | 0.716 |
0.8988 |
| 4m1b-assembly2.cif.gz_B | 1 | 269 | 10 | 200 | 0.6934 |
0.8834 |
| 3rxz-assembly1.cif.gz_B | 1 | 281 | 14 | 284 | 0.687 |
0.7571 |
| 5lgc-assembly1.cif.gz_A | 1 | 293 | 7 | 199 | 0.6861 |
0.8643 |
| 2cc0-assembly1.cif.gz_B | 1 | 267 | 3 | 186 | 0.6814 |
0.8801 |
| 7ax7-assembly1.cif.gz_A | 1 | 293 | 2 | 200 | 0.6796 |
0.8467 |
| 2c79-assembly1.cif.gz_A | 2 | 293 | 1 | 201 | 0.677 |
0.8355 |
| 6h8n-assembly1.cif.gz_A | 1 | 272 | 5 | 193 | 0.6752 |
0.8737 |
| 6h8l-assembly1.cif.gz_A | 1 | 272 | 5 | 193 | 0.6738 |
0.872 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A4WAM2-F1-model_v4 | 1 | 298 | 1 | 298 | 0.9576 |
0.9702 |
| AF-B5R273-F1-model_v4 | 1 | 299 | 1 | 299 | 0.9198 |
0.9307 |
| AF-B2VBI8-F1-model_v4 | 1 | 296 | 1 | 296 | 0.9194 |
0.9353 |
| AF-B5XTL0-F1-model_v4 | 1 | 300 | 1 | 300 | 0.9189 |
0.9277 |
| AF-A6TF97-F1-model_v4 | 1 | 300 | 1 | 300 | 0.9181 |
0.9275 |
| AF-B5BCP5-F1-model_v4 | 1 | 299 | 1 | 299 | 0.9173 |
0.9282 |
| AF-A9N5B1-F1-model_v4 | 1 | 299 | 1 | 299 | 0.9172 |
0.9284 |
| AF-B4TPI3-F1-model_v4 | 1 | 299 | 1 | 299 | 0.917 |
0.9279 |
| AF-Q5PNA7-F1-model_v4 | 1 | 299 | 1 | 299 | 0.9165 |
0.9274 |
| AF-O52326-F1-model_v4 | 1 | 299 | 1 | 299 | 0.9156 |
0.9269 |