PROTEIN: HRGMv2_1802_1_58
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Protein File & Metadata
Source:
HRGMv2_1802_1_58.pdb
Genome ID:
Protein ID:
HRGMv2_1802_1_58
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Protein Sequence
MSRSIRICSY LVLPLLYLLV NVKLAQLGES FPITLVTFLP VLLLLFVERI NIKKLMIALG 60 LGGGLTVFNY LFGQSLDASK YVTSAMLFIY TVVIIGMVWS IRFKTISPHN YIKILRFFWL 120 VVGLVVGLAA VEMAQIILSG GSSLMEAISK YLIYSNSYVL NFIKFGGKRT TALYFEPAFF 180 ALALISIWLS IKQFGIKTPK SDAMILAGII LSGSFSGVMT FILFYLLEWA FQYLNKDAIK 240 KKLPLAIISL SVFVVGVIFA FPYIATRLSD LGTEGSSSYY RIVGPLVMVG YSLMHVDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LIINFSWFAV ILTLWYMGKV MKMMFTAFGD 360 NQNYRVQLYL FTPLSMFFTG SVFSPEYAFL IVCPFILRKA LNIAR 405
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-H9L488-F1-model_v4 | 1 | 404 | 1 | 404 | 0.9853 |
0.9912 |
| AF-P71238-F1-model_v4 | 1 | 405 | 1 | 405 | 0.9853 |
0.99 |
| AF-Q2G288-F1-model_v4 | 1 | 405 | 5 | 407 | 0.7001 |
0.7347 |
| AF-Q9I1M9-F1-model_v4 | 1 | 405 | 38 | 453 | 0.6752 |
0.7508 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 1 | 405 | 17 | 445 | 0.5551 |
0.7279 |
| UII34295.1 | GT4 | 1 | 405 | 8 | 416 | 0.5506 |
0.7313 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 1 | 405 | 17 | 445 | 0.5551 |
0.7279 |
| UII34295.1 | GT4 | 1 | 405 | 8 | 416 | 0.5506 |
0.7313 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 405 | 1 | 405 | 0.9853 |
0.99 |
| AF-O32270-F1-model_v4 | 2 | 405 | 3 | 480 | 0.6438 |
0.7216 |