PROTEIN: HRGMv2_1802_16_43
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Protein File & Metadata
Source:
HRGMv2_1802_16_43.pdb
Genome ID:
Protein ID:
HRGMv2_1802_16_43
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Protein Sequence
MNNISHYCRA IIALPFFCVS SLGAEEVRPA EHYDTKTPAI TSPSFRFYGE LGMGGYMDLE 60 GKDKHKYSDG TYIEGGLEIK HGSWFGLIYG EGWTVQADHQ GNAWVPDHSW GGFEGGINRF 120 YGGYRTDAGT EMMLSLRQDS SLDDLQWWGD FTPDLGYVIP NTRDIMTAIK VQNLTGPLRY 180 SVTATPAGHH DESKAWLHFG KYDRYDDKYT YPAMMNGYIQ YDLTEGVTWM NGLEITDGTG 240 QLFLTGILTP NFAARAWHHT GRADGLDVSG TETGYMISAM YEALKGVYLS TAYSYAKHRP 300 DRAEEETTSF MQFGIWYEYG GGRFATAFDS RFYMQNASGD PSDQIFLMQY FYW 353
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 1 | 353 | 2 | 356 | 0.9621 |
0.9737 |
| AF-P37432-F1-model_v4 | 30 | 353 | 16 | 363 | 0.7313 |
0.8198 |
| AF-P43839-F1-model_v4 | 34 | 353 | 17 | 359 | 0.7183 |
0.81 |
| AF-P21420-F1-model_v4 | 30 | 353 | 17 | 365 | 0.7161 |
0.8062 |
| AF-Q9S4Z2-F1-model_v4 | 23 | 353 | 13 | 377 | 0.7146 |
0.8002 |
| AF-Q8ZPH7-F1-model_v4 | 31 | 353 | 17 | 372 | 0.7121 |
0.8122 |
| AF-Q5F5V7-F1-model_v4 | 41 | 353 | 17 | 348 | 0.6895 |
0.7822 |
| AF-Q9I2D1-F1-model_v4 | 28 | 353 | 20 | 399 | 0.6718 |
0.7821 |
| AF-Q8ZMK7-F1-model_v4 | 4 | 353 | 16 | 456 | 0.6133 |
0.7065 |
| AF-Q9SXB7-F1-model_v4 | 41 | 353 | 78 | 424 | 0.6122 |
0.7586 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0F6ALB9 | CBM48 | 38 | 352 | 382 | 674 | 0.3757 |
0.5845 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5o78-assembly1.cif.gz_C | 41 | 353 | 1 | 331 | 0.7484 |
0.8291 |
| 3nsg-assembly1.cif.gz_C | 35 | 353 | 1 | 341 | 0.7468 |
0.8246 |
| 4kr8-assembly1.cif.gz_B | 35 | 353 | 1 | 340 | 0.746 |
0.8227 |
| 4kr4-assembly1.cif.gz_B | 35 | 353 | 1 | 340 | 0.746 |
0.8227 |
| 4kra-assembly1.cif.gz_C | 35 | 353 | 1 | 337 | 0.7454 |
0.8192 |
| 6ehe-assembly1.cif.gz_A | 41 | 353 | 1 | 302 | 0.7451 |
0.8137 |
| 4kra-assembly1.cif.gz_B | 35 | 353 | 1 | 340 | 0.7451 |
0.8221 |
| 6ehb-assembly1.cif.gz_C | 29 | 353 | 2 | 320 | 0.743 |
0.7944 |
| 5o77-assembly1.cif.gz_A | 35 | 353 | 1 | 337 | 0.7426 |
0.8163 |
| 4kr4-assembly1.cif.gz_C | 35 | 353 | 1 | 334 | 0.7425 |
0.8124 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 1 | 353 | 2 | 356 | 0.9621 |
0.9737 |
| AF-Q52581-F1-model_v4 | 25 | 353 | 3 | 341 | 0.7405 |
0.7932 |
| AF-P29739-F1-model_v4 | 32 | 353 | 16 | 326 | 0.7333 |
0.8098 |
| AF-J9RX10-F1-model_v4 | 30 | 353 | 15 | 357 | 0.7333 |
0.8161 |
| AF-A0A0H3N9T8-F1-model_v4 | 29 | 353 | 13 | 363 | 0.7323 |
0.8186 |
| AF-Q56113-F1-model_v4 | 29 | 353 | 13 | 363 | 0.7317 |
0.8178 |
| AF-P37432-F1-model_v4 | 30 | 353 | 16 | 363 | 0.7313 |
0.8198 |
| AF-Q48221-F1-model_v4 | 33 | 353 | 17 | 353 | 0.7244 |
0.8091 |
| AF-O54340-F1-model_v4 | 34 | 353 | 17 | 343 | 0.7231 |
0.7988 |
| AF-Q8DBX0-F1-model_v4 | 26 | 353 | 6 | 340 | 0.7218 |
0.7763 |