PROTEIN: HRGMv2_1794_11_128
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Protein File & Metadata
Source:
HRGMv2_1794_11_128.pdb
Genome ID:
Protein ID:
HRGMv2_1794_11_128
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Protein Sequence
MKTNSYVYGA LVALAFCAPA AAAETVHPAE HDDTKTPELT TTSYRFYGEL GVGGYMDLEG 60 EDKHKYSDGT YIEGGLEVKN GHWFGLIYGE AWTVQADSQG NAWTPGHSWG GVEGGLNRLY 120 GGYKTDNNTE IMLSLRQDSS LDDLQWWGDF TPDLGYVIPN TRDIMYALKV QNRSGDFRYS 180 VTATPAGHHD ESKAWLHFGK YDRYDDKYTY PAMINGYVQY DIVKDVTWMN GLEVTDGTGQ 240 LFLTGVLSPN LAFRAWHHTG RAKGLDVPGS ETGFMASAMY EALSGLYFST AYSYAKHRPD 300 HAADETTAFM QFGIWYEYGG GRFATAADSR FYTSNASGDP SDKIFLMQYF YW 352
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 14 | 352 | 17 | 356 | 0.9182 |
0.9654 |
| AF-P37432-F1-model_v4 | 28 | 352 | 16 | 363 | 0.732 |
0.8173 |
| AF-Q32E50-F1-model_v4 | 27 | 352 | 15 | 362 | 0.723 |
0.8052 |
| AF-P02931-F1-model_v4 | 27 | 352 | 15 | 362 | 0.7223 |
0.8043 |
| AF-P43839-F1-model_v4 | 32 | 352 | 17 | 359 | 0.7201 |
0.8095 |
| AF-P06996-F1-model_v4 | 27 | 352 | 14 | 367 | 0.719 |
0.8053 |
| AF-Q5F5V7-F1-model_v4 | 40 | 352 | 17 | 348 | 0.6914 |
0.7832 |
| AF-Q9I2D1-F1-model_v4 | 26 | 352 | 21 | 399 | 0.6837 |
0.7926 |
| AF-Q9SXB7-F1-model_v4 | 40 | 352 | 78 | 424 | 0.6136 |
0.7604 |
| AF-Q9I6X0-F1-model_v4 | 22 | 352 | 1 | 441 | 0.6043 |
0.7279 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5o78-assembly1.cif.gz_C | 40 | 352 | 1 | 331 | 0.749 |
0.8288 |
| 3nsg-assembly1.cif.gz_C | 34 | 352 | 1 | 341 | 0.7482 |
0.8253 |
| 4kr4-assembly1.cif.gz_B | 34 | 352 | 1 | 340 | 0.7479 |
0.8238 |
| 6ehe-assembly1.cif.gz_A | 40 | 352 | 1 | 302 | 0.7473 |
0.8148 |
| 4kra-assembly1.cif.gz_B | 34 | 352 | 1 | 340 | 0.7469 |
0.823 |
| 4kr8-assembly1.cif.gz_B | 34 | 352 | 1 | 340 | 0.7467 |
0.8225 |
| 4kra-assembly1.cif.gz_C | 34 | 352 | 1 | 337 | 0.7453 |
0.8182 |
| 5o77-assembly1.cif.gz_A | 34 | 352 | 1 | 337 | 0.7441 |
0.817 |
| 6ene-assembly1.cif.gz_C | 34 | 352 | 1 | 329 | 0.7432 |
0.8083 |
| 6ehb-assembly1.cif.gz_B | 27 | 352 | 2 | 317 | 0.7428 |
0.7969 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 14 | 352 | 17 | 356 | 0.9182 |
0.9654 |
| AF-Q52581-F1-model_v4 | 23 | 352 | 2 | 341 | 0.7427 |
0.7927 |
| AF-P29739-F1-model_v4 | 30 | 352 | 16 | 326 | 0.7344 |
0.8101 |
| AF-J9RX10-F1-model_v4 | 28 | 352 | 15 | 357 | 0.7336 |
0.8131 |
| AF-Q56113-F1-model_v4 | 27 | 352 | 13 | 363 | 0.7333 |
0.8164 |
| AF-A0A0H3N9T8-F1-model_v4 | 27 | 352 | 13 | 363 | 0.7326 |
0.8157 |
| AF-P37432-F1-model_v4 | 28 | 352 | 16 | 363 | 0.732 |
0.8173 |
| AF-Q48221-F1-model_v4 | 30 | 352 | 16 | 353 | 0.7268 |
0.806 |
| AF-O54340-F1-model_v4 | 30 | 352 | 16 | 343 | 0.7242 |
0.7919 |
| AF-P0C6Q6-F1-model_v4 | 25 | 352 | 20 | 341 | 0.7228 |
0.7898 |