PROTEIN: HRGMv2_1728_22_40
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Protein File & Metadata
Source:
HRGMv2_1728_22_40.pdb
Genome ID:
Protein ID:
HRGMv2_1728_22_40
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Protein Sequence
MKEVFQMLKD PRFHLVYGVT QRYSDGPEPR RVRLNREGYK LVEGVTKKAL VYPRMRLAVH 60 PSPLKGDAFS PIFGRITDVT ERSLFVEAIE PDEALRALAD SVEKVDLIND ERTGQELAVL 120 LKSLGLNTKS LGQQCETLII NGLNPDPGVT WAEPMLLTHQ STLRAGLAVL RRLSPAKRIL 180 LAVPSELHLH FDDVEVVRVT ARYPASVNAL LVKSITGKEN PEDVGVVGLH NVWSLGRVAR 240 TGLPLIESVI TLGSYTHSGN YIVKEGSMLG ELLEFAHIKL NSGDTLVRGG PLRGESIDRL 300 DRSITKGATG VFVVEAGTVP PMEGHSPCIN CGACVLICPA RLSPSMLSRN AEFALHERCR 360 DEHVDCCLEC GLCGYVCIAR RPVLQYIRLA KHKLAQADEA RRLKERELRP AAQPAAEAKE 420 GEN 423
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GTN0-F1-model_v4 | 6 | 413 | 20 | 466 | 0.7206 |
0.867 |
| AF-P43955-F1-model_v4 | 5 | 402 | 7 | 447 | 0.7095 |
0.7922 |
| AF-Q5F6Y0-F1-model_v4 | 5 | 402 | 7 | 447 | 0.7089 |
0.791 |
| AF-A0A0H3GJV1-F1-model_v4 | 5 | 402 | 7 | 447 | 0.7066 |
0.7889 |
| AF-Q9HZK6-F1-model_v4 | 5 | 402 | 7 | 445 | 0.704 |
0.7844 |
| AF-P77611-F1-model_v4 | 6 | 413 | 20 | 465 | 0.6596 |
0.874 |
| AF-Q32FE4-F1-model_v4 | 6 | 420 | 20 | 751 | 0.6596 |
0.8729 |
| AF-Q8ZPM2-F1-model_v4 | 6 | 413 | 20 | 466 | 0.6592 |
0.8713 |
| AF-Q9HYB8-F1-model_v4 | 7 | 413 | 11 | 458 | 0.6457 |
0.8708 |
| AF-P71397-F1-model_v4 | 7 | 413 | 20 | 466 | 0.6446 |
0.8862 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7zc6-assembly1.cif.gz_C | 6 | 398 | 10 | 435 | 0.7741 |
0.8594 |
| 8ahx-assembly1.cif.gz_C | 6 | 414 | 10 | 457 | 0.7713 |
0.859 |
| 8ad0-assembly1.cif.gz_A | 5 | 402 | 7 | 403 | 0.7212 |
0.7715 |
| 8acw-assembly1.cif.gz_A | 5 | 402 | 7 | 398 | 0.7151 |
0.7684 |
| 8a1w-assembly1.cif.gz_A | 5 | 402 | 7 | 446 | 0.7071 |
0.7888 |
| 4u9q-assembly1.cif.gz_A | 10 | 316 | 1 | 304 | 0.6449 |
0.7646 |
| 4u9q-assembly2.cif.gz_B | 10 | 321 | 1 | 303 | 0.6435 |
0.7642 |
| 4u9o-assembly1.cif.gz_A | 9 | 321 | 1 | 303 | 0.6405 |
0.761 |
| 6q9k-assembly1.cif.gz_B | 17 | 386 | 5 | 407 | 0.535 |
0.6177 |
| 8b9z-assembly1.cif.gz_F | 59 | 386 | 1 | 422 | 0.5344 |
0.7016 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D8GR66-F1-model_v4 | 7 | 413 | 9 | 451 | 0.8089 |
0.8859 |
| AF-Q89AW8-F1-model_v4 | 1 | 417 | 23 | 483 | 0.8054 |
0.8994 |
| AF-Q8TSY4-F1-model_v4 | 2 | 406 | 1 | 447 | 0.8036 |
0.8738 |
| AF-H6LC32-F1-model_v4 | 6 | 405 | 12 | 443 | 0.7843 |
0.8629 |
| AF-D5ARZ1-F1-model_v4 | 6 | 416 | 22 | 473 | 0.7654 |
0.8783 |
| AF-Q52716-F1-model_v4 | 6 | 416 | 22 | 473 | 0.7642 |
0.877 |
| AF-A7FLJ8-F1-model_v4 | 5 | 402 | 7 | 447 | 0.7115 |
0.7939 |
| AF-A3MYM2-F1-model_v4 | 5 | 402 | 7 | 449 | 0.7115 |
0.7956 |
| AF-Q8ZBZ0-F1-model_v4 | 5 | 402 | 7 | 447 | 0.7112 |
0.7935 |
| AF-B0BS55-F1-model_v4 | 5 | 402 | 7 | 449 | 0.711 |
0.7955 |