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PROTEIN: HRGMv2_1720_19_12

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_1720_19_12.pdb
Genome ID:
HRGMv2_1720
Protein ID:
HRGMv2_1720_19_12

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSDKNLNQIK   SEKIAPSLHD   AADQEVKMSS   SRMSRTALAT   KNAAFGLVGQ   VVNLVVAFAS 60
RTVFIYVLGE   YYLGVNYLFV   DILNVLSFAE   LGFGSAMTFA   LYSPVAKGQS   EKVQQLIYFY 120
RNAYRVIAFV   VLLFGLALLP   FLQYLVSGAG   TITLSELRLY   FLIFLANTVI   SYFVTYKFGL 180
LNALQKTYVQ   TNFGTITTTA   CSLAQIAALV   LVQSFLVYLL   ANFAVLTVSR   FVLARYLNDR 240
YPILKNKPEN   LLPKSEKRKI   LHEVKGLAVH   QFSGVAVHAT   DSIIIAAIPA   LGIVLVGAVG 300
NYNMIIMAVQ   AINLVLVNSV   VAGFGNLAAL   ESKQKFREVF   DEANFIGFWV   FGLCTVCFFV 360
LLPSFIELWI   GETYLIDAAS   FTLILVNFYL   QGLSVVYNNA   RIAKGNFNKD   KWWSLLQAVT 420
NLVVSVVCAL   QFGLVGVFVG   TVVSRLVFVI   SRPCSTYRFL   FGCSPRRYFV   DTVKYCLFVV 480
LAAVVSASVT   AVFLSALSIA   NFCLATIVCF   VFTNVVFFVC   TFKSPVFRAV   KKRVSYLAKP 540
LLERGDHS 548
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q58467-F1-model_v4 32 541 1 507 0.8427 0.8902
AF-Q8DPI1-F1-model_v4 29 548 1 495 0.8316 0.8887
AF-Q2G262-F1-model_v4 32 544 1 476 0.8266 0.8979
AF-H9L497-F1-model_v4 33 545 1 486 0.8252 0.8941
AF-P77377-F1-model_v4 33 545 1 486 0.8194 0.8883
AF-A0A0H3GSJ3-F1-model_v4 33 543 1 478 0.815 0.8856
AF-Q2G0R7-F1-model_v4 30 542 1 503 0.7969 0.8511
AF-Q23444-F1-model_v4 35 544 1 522 0.786 0.8388
AF-Q9I1M8-F1-model_v4 37 532 1 469 0.7859 0.8631
AF-Q32ET1-F1-model_v4 34 537 1 510 0.7825 0.8385
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T089-F1-model_v4 GT4 32 541 1 508 0.8041 0.8572
AF-A0A160T2N7-F1-model_v4 GT28 30 541 34 545 0.7695 0.8366
QNU38870.1 GT4 36 548 1 482 0.7235 0.8694
QJC17489.1 GT2 26 548 126 849 0.684 0.8742
AF-A0A3T0RPT8-F1-model_v4 GT4 29 546 1 586 0.6544 0.8443
AF-D1BIF1-F1-model_v4 GT4 32 548 6 659 0.6497 0.8787
AF-A0A3Q9G719-F1-model_v4 GT4 32 544 1 589 0.6441 0.8578
AF-A0A2U8PPB3-F1-model_v4 GT4 36 548 1 583 0.6329 0.8195
AF-A1R6N5-F1-model_v4 GT2 26 548 1 501 0.6288 0.8361
AF-A0A517Z2I8-F1-model_v4 GT2 31 548 4 672 0.6285 0.8207
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T089 GT4 32 541 1 508 0.8041 0.8572
A0A160T2N7 GT28 30 541 34 545 0.7695 0.8366
QNU38870.1 GT4 36 548 1 482 0.7235 0.8694
QJC17489.1 GT2 26 548 126 849 0.684 0.8742
A0A3T0RPT8 GT4 29 546 1 586 0.6544 0.8443
D1BIF1 GT4 32 548 6 659 0.6497 0.8787
A0A3Q9G719 GT4 32 544 1 589 0.6441 0.8578
A0A2U8PPB3 GT4 36 548 1 583 0.6329 0.8195
A0A517Z2I8 GT2 31 548 4 672 0.6285 0.8207
A0A0C5BEZ8 GT4 33 547 1 589 0.6276 0.8303
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7waw-assembly1.cif.gz_A 44 534 1 496 0.7732 0.8368
6nc6-assembly2.cif.gz_B 40 532 1 461 0.7703 0.8515
7wag-assembly1.cif.gz_A 36 537 2 510 0.7444 0.811
6cc4-assembly1.cif.gz_A 28 538 54 608 0.7289 0.8332
6fhz-assembly1.cif.gz_A 39 464 8 436 0.7212 0.8379
6gwh-assembly1.cif.gz_A 26 462 1 435 0.6364 0.7315
3wbn-assembly1.cif.gz_A 29 461 1 445 0.6356 0.7407
5xjj-assembly1.cif.gz_A 34 462 6 435 0.6322 0.7409
6ids-assembly1.cif.gz_A 34 461 6 431 0.6294 0.7346
3vvn-assembly1.cif.gz_A 26 462 1 441 0.626 0.7213
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P71060-F1-model_v4 37 548 1 505 0.8587 0.9078
AF-Q58467-F1-model_v4 32 541 1 507 0.8427 0.8902
AF-Q48457-F1-model_v4 33 544 1 485 0.8248 0.8906
AF-P77377-F1-model_v4 33 545 1 486 0.8194 0.8883
AF-P33699-F1-model_v4 30 544 3 488 0.8139 0.8847
AF-D4GU68-F1-model_v4 35 544 1 472 0.81 0.8849
AF-D4GYG8-F1-model_v4 36 544 1 476 0.8044 0.8764
AF-O32273-F1-model_v4 30 545 1 483 0.802 0.8693
AF-O34238-F1-model_v4 30 536 2 525 0.798 0.8591
AF-O83529-F1-model_v4 29 543 1 526 0.7913 0.842
Download Full SwissProt Results