PROTEIN: HRGMv2_1715_26_25
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Protein File & Metadata
Source:
HRGMv2_1715_26_25.pdb
Genome ID:
Protein ID:
HRGMv2_1715_26_25
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Protein Sequence
MPMRKRERFE RTDVPEGGPY RNVIGAVVCV VALAAAALIV HFVWERVTLE SRLGDVGLSD 60 SLSSQSASDV TEGTSYVASA DDHETVLLLT ADDLEAGALS AVRILDVNRT QGTAVLANVP 120 VTTRVTSGET ASSVADLFAA SGGSACVAPL SQATGATFDH VVVATGDVVE EAAAIAGTGA 180 SDLVRSASDL LSKMRTDMDA TDLLALAEAL SSIGTANIAV SEASVAPETV TDEAGNAVET 240 GLQVVDRAQL CAALGLIVPA A 261
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FVV8-F1-model_v4 | 46 | 258 | 31 | 306 | 0.5344 |
0.7121 |
| AF-A0A133CEN2-F1-model_v4 | 47 | 260 | 41 | 313 | 0.53 |
0.7085 |
| AF-Q8DNG0-F1-model_v4 | 47 | 260 | 33 | 314 | 0.508 |
0.7 |
| AF-Q7BHL7-F1-model_v4 | 50 | 258 | 66 | 327 | 0.4983 |
0.6909 |
| AF-A0A077ZKB0-F1-model_v4 | 44 | 260 | 33 | 311 | 0.4933 |
0.722 |
| AF-P52078-F1-model_v4 | 47 | 260 | 33 | 317 | 0.4933 |
0.7293 |
| AF-A0A132P395-F1-model_v4 | 44 | 260 | 32 | 309 | 0.4871 |
0.7121 |
| AF-K0ELZ4-F1-model_v4 | 44 | 259 | 151 | 431 | 0.4572 |
0.6893 |
| AF-Q7APX1-F1-model_v4 | 33 | 260 | 37 | 369 | 0.4551 |
0.6881 |
| AF-Q8DPD6-F1-model_v4 | 47 | 258 | 120 | 422 | 0.4535 |
0.6835 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3nxh-assembly1.cif.gz_A | 81 | 258 | 3 | 215 | 0.5457 |
0.7331 |
| 3mej-assembly1.cif.gz_A | 54 | 258 | 1 | 248 | 0.5448 |
0.6872 |
| 6mpt-assembly1.cif.gz_A | 53 | 258 | 1 | 251 | 0.5429 |
0.6851 |
| 6mps-assembly1.cif.gz_A | 53 | 258 | 1 | 253 | 0.5423 |
0.686 |
| 4de9-assembly1.cif.gz_A | 53 | 258 | 1 | 238 | 0.5357 |
0.6594 |
| 3owq-assembly4.cif.gz_D | 81 | 258 | 2 | 234 | 0.5335 |
0.7451 |
| 3owq-assembly1.cif.gz_A | 81 | 258 | 1 | 234 | 0.5318 |
0.7425 |
| 6uf6-assembly1.cif.gz_A | 81 | 258 | 1 | 224 | 0.5318 |
0.7347 |
| 3owq-assembly2.cif.gz_B | 81 | 258 | 1 | 231 | 0.5277 |
0.7315 |
| 6uf3-assembly1.cif.gz_A | 81 | 258 | 3 | 251 | 0.5274 |
0.758 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9K6Q8-F1-model_v4 | 43 | 258 | 28 | 301 | 0.5521 |
0.7219 |
| AF-Q65E87-F1-model_v4 | 44 | 258 | 37 | 304 | 0.5454 |
0.7189 |
| AF-Q02115-F1-model_v4 | 44 | 258 | 37 | 304 | 0.5435 |
0.7166 |
| AF-Q7WY78-F1-model_v4 | 43 | 258 | 41 | 320 | 0.5281 |
0.7066 |
| AF-Q8ENF3-F1-model_v4 | 47 | 258 | 44 | 317 | 0.5273 |
0.7165 |
| AF-Q81K33-F1-model_v4 | 47 | 258 | 33 | 300 | 0.527 |
0.701 |
| AF-Q815A2-F1-model_v4 | 47 | 260 | 33 | 303 | 0.5269 |
0.6955 |
| AF-Q630Y6-F1-model_v4 | 47 | 260 | 33 | 302 | 0.5264 |
0.6941 |
| AF-C3LEN7-F1-model_v4 | 47 | 258 | 33 | 300 | 0.526 |
0.6984 |
| AF-B7JGI9-F1-model_v4 | 47 | 258 | 33 | 300 | 0.5256 |
0.6979 |