dbCAN Logo

PROTEIN: HRGMv2_1652_4_6

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_1652_4_6.pdb
Genome ID:
HRGMv2_1652
Protein ID:
HRGMv2_1652_4_6

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MSRQYEPLSI   KKNMLWNSAG   SLCNLGCQWL   ISVLIVRLST   GYDAAGIYSL   GISTYNIFGS 60
IAQYRMYTYQ   VSDVKNENTT   GEYLTFRLIT   GLSALALCSI   YGVVTCSPAA   WATIALYALY 120
KTATLIIDVF   HACDQRFHRM   DFIGISLALQ   GVISLACFTL   VFGSTGSVEL   ALILMTLGVC 180
LVGSLYDFKR   ASSFGRIKLG   ISRQKAIYLL   TKCLPVVIAG   IAASATSSLP   RQALSNIMGS 240
TVLGVYASVA   APVAIIQMGA   SYIYNPMLGY   FSERFAENDL   VGFRQQLAKT   MGGIFAVGAC 300
CVIGFTLVGP   QFLSLVFGES   ITSYVYLLVP   MVISAIVAGV   QWFVNDLLIA   LRSFRPTLVS 360
AIISLIVTFA   LENLLITQYG   PNGVTLTNIA   TSLIGLIIMG   FALSSLIRSK   H 411
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P71399-F1-model_v4 8 410 1 401 0.8452 0.8751
AF-P37746-F1-model_v4 7 411 4 415 0.8326 0.8698
AF-P26400-F1-model_v4 6 410 7 430 0.8241 0.8746
AF-P0AAA7-F1-model_v4 8 411 1 416 0.8199 0.8611
AF-A0A0H3GLL0-F1-model_v4 8 410 1 416 0.8127 0.8563
AF-Q9L6Q9-F1-model_v4 8 410 1 416 0.8126 0.8563
AF-Q329X0-F1-model_v4 8 410 1 416 0.8076 0.8513
AF-Q32EG2-F1-model_v4 11 404 3 396 0.8049 0.8464
AF-P9WKX9-F1-model_v4 4 408 21 431 0.8037 0.8538
AF-K0EXA3-F1-model_v4 4 411 25 439 0.8035 0.8678
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T089-F1-model_v4 GT4 6 410 3 437 0.7883 0.901
AF-A0A160T2N7-F1-model_v4 GT28 6 409 38 467 0.7509 0.8809
QNU38870.1 GT4 9 409 1 408 0.7151 0.8805
AF-A0A345VG16-F1-model_v4 GT2 3 411 266 681 0.6785 0.8644
B1FZW0 GT2 8 411 5 429 0.6711 0.8736
AF-A0A5B8KBR4-F1-model_v4 GT2 4 411 268 681 0.6706 0.8586
AF-A0A248VQW5-F1-model_v4 GT2 8 411 5 429 0.6696 0.8717
AF-A0A1P8M2V1-F1-model_v4 GT2 5 411 273 686 0.665 0.8557
A0A543Z557 GH16_5 1 411 14 437 0.6579 0.8529
A0A836MCF6 GT100 8 411 1 402 0.6574 0.8572
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T089 GT4 6 410 3 437 0.7883 0.901
A0A160T2N7 GT28 6 409 38 467 0.7509 0.8809
QNU38870.1 GT4 9 409 1 408 0.7151 0.8805
B1FZW0 GT2 8 411 5 429 0.6711 0.8736
A0A543Z557 GH16_5 1 411 14 437 0.6579 0.8529
A0A836MCF6 GT100 8 411 1 402 0.6574 0.8572
A0A0J6W0G8 GH16_3 2 411 8 427 0.6502 0.8307
A0A2U8PPB3 GT4 10 408 1 404 0.6491 0.9003
A0A2W1ZQY8 GT4 9 411 1 403 0.6413 0.8744
A0A4V3CWU6 GT4 10 409 1 405 0.6407 0.8881
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fhz-assembly1.cif.gz_A 14 411 10 437 0.7849 0.8567
7waw-assembly1.cif.gz_A 15 410 1 428 0.7585 0.874
6nc6-assembly2.cif.gz_B 11 405 1 405 0.7337 0.8236
5y50-assembly1.cif.gz_A 10 410 9 438 0.7005 0.7727
4mlb-assembly1.cif.gz_C 5 411 2 451 0.6786 0.7448
6hfb-assembly3.cif.gz_C 6 411 3 450 0.6756 0.7432
6gwh-assembly1.cif.gz_A 4 411 1 438 0.6748 0.7323
3wbn-assembly1.cif.gz_A 6 411 1 449 0.6736 0.7404
3vvn-assembly1.cif.gz_A 6 411 1 444 0.6672 0.7308
5xjj-assembly1.cif.gz_A 10 410 10 439 0.6667 0.7385
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P39855-F1-model_v4 10 408 1 396 0.8981 0.9295
AF-P71399-F1-model_v4 8 410 1 401 0.8452 0.8751
AF-Q45411-F1-model_v4 6 411 7 429 0.8368 0.8893
AF-P37746-F1-model_v4 7 411 4 415 0.8326 0.8698
AF-Q99191-F1-model_v4 6 411 8 432 0.8294 0.8793
AF-P26400-F1-model_v4 6 410 7 430 0.8241 0.8746
AF-Q05347-F1-model_v4 6 411 2 430 0.8225 0.8769
AF-Q9CNC5-F1-model_v4 8 409 1 399 0.8215 0.8555
AF-P0AAA7-F1-model_v4 8 411 1 416 0.8199 0.8611
AF-P37781-F1-model_v4 8 411 1 418 0.8186 0.8614
Download Full SwissProt Results