PROTEIN: HRGMv2_1640_25_52
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Protein File & Metadata
Source:
HRGMv2_1640_25_52.pdb
Genome ID:
Protein ID:
HRGMv2_1640_25_52
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Protein Sequence
MQNFNNNTSI AYLSDIKRAA EMHVSELMFI IAFLLLLLED PIAQFFPYAN FLDETFALIG 60 FFVYLISSNK IKLNILVPVF LYIMSAFVGW IFNSQQPLIA VVNDAFLNLK FFFALLFGVS 120 VVNILSPLSI KIIAKIAKIL TLFLTVIIIY NFFFHIFPGQ EYRFGIQIPK LFFSHSEYLA 180 GFQVLLLAVG LLGGVEKKSI WENTWILISV LNILSTLRYK AIIASVFIVI LLYIVIFRKK 240 IFAKWNFIVL AIVAVLIAWS QIVEYFFDTV TARGALTSTS ITIAKDYFPF GIGFASFGSY 300 MSKVFYSPFY YQYGLSSIYG LMNIDGANSF ISDTFWPMVI AQSGIVGTVC FVWALGSLYK 360 KINGIYYENI YLYSVSLYLF GYMIIQSTGS AAFVGPIAVP VGIIIGICIG MAKSKNFFQL 420 INRENE 426
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CYC1-F1-model_v4 | 10 | 425 | 1 | 397 | 0.6584 |
0.7063 |
| AF-Q9HUG6-F1-model_v4 | 22 | 419 | 16 | 394 | 0.6565 |
0.7343 |
| AF-O25682-F1-model_v4 | 21 | 418 | 8 | 429 | 0.6542 |
0.7213 |
| AF-P26471-F1-model_v4 | 19 | 415 | 12 | 404 | 0.6276 |
0.684 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7D6J0J0-F1-model_v4 | GT4 | 23 | 419 | 19 | 423 | 0.6659 |
0.732 |
| AF-Q4JZZ9-F1-model_v4 | GT4 | 8 | 415 | 1 | 406 | 0.6599 |
0.7015 |
| AF-Q51524-F1-model_v4 | GT0 | 22 | 415 | 11 | 401 | 0.6197 |
0.7147 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 21 | 422 | 1 | 412 | 0.5668 |
0.7379 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 20 | 422 | 1 | 412 | 0.5638 |
0.7322 |
| AF-M1FGR5-F1-model_v4 | GT2 | 21 | 422 | 2 | 412 | 0.5632 |
0.7341 |
| AF-E4PMS8-F1-model_v4 | GT2 | 21 | 422 | 1 | 411 | 0.5616 |
0.7308 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 21 | 420 | 1 | 409 | 0.5572 |
0.7272 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 21 | 421 | 4 | 413 | 0.5567 |
0.726 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 23 | 422 | 1 | 406 | 0.5563 |
0.725 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7D6J0J0 | GT4 | 23 | 419 | 19 | 423 | 0.6659 |
0.732 |
| Q4JZZ9 | GT4 | 8 | 415 | 1 | 406 | 0.6599 |
0.7015 |
| QSP96058.1 | GT2 | 21 | 421 | 6 | 417 | 0.5543 |
0.7246 |
| B5YD26 | GT9 | 22 | 426 | 42 | 563 | 0.5458 |
0.7448 |
| A0A517MXC4 | GT26 | 21 | 418 | 18 | 447 | 0.5372 |
0.7331 |
| A0A9Q9IL13 | GT4 | 23 | 419 | 19 | 500 | 0.5371 |
0.7907 |
| WBY01952.1 | GT9 | 17 | 419 | 8 | 412 | 0.5282 |
0.7189 |
| H8L3P3 | GT2 | 6 | 426 | 2 | 714 | 0.5276 |
0.6857 |
| D5MJ04 | GT9 | 22 | 423 | 22 | 564 | 0.5263 |
0.7193 |
| M4X4V7 | GH39 | 23 | 417 | 18 | 420 | 0.5164 |
0.7473 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 22 | 422 | 2 | 379 | 0.6653 |
0.7295 |
| AF-Q9HUG6-F1-model_v4 | 22 | 419 | 16 | 394 | 0.6565 |
0.7343 |
| AF-P26471-F1-model_v4 | 19 | 415 | 12 | 404 | 0.6276 |
0.684 |
| AF-Q48456-F1-model_v4 | 7 | 422 | 7 | 429 | 0.6214 |
0.6671 |
| AF-Q6F7F9-F1-model_v4 | 19 | 414 | 3 | 404 | 0.5983 |
0.7321 |
| AF-Q6FFS6-F1-model_v4 | 19 | 414 | 15 | 423 | 0.5822 |
0.7224 |