PROTEIN: HRGMv2_1610_1_23
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Protein File & Metadata
Source:
HRGMv2_1610_1_23.pdb
Genome ID:
Protein ID:
HRGMv2_1610_1_23
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Protein Sequence
MSDRTKGKSR TAFAAKSSIY GLVGKGVSLL VSFVSRTVFI HILGKYYLGI NGLYSEILSF 60 LSFAELGFGS AMTFALYGPV EREENEKVRE LMQFYKVTYR LIAFVVLAFG LAVTPFLQYI 120 VNGAEGLSLF ELRLYFLIFL ANTVTTYFVT YKFGYSNAIQ EAYVSTNFDT LTNLVCAFVQ 180 LVALVLTGSF LVYLLSYTAT LILSRFAVAF YLNRRYPILK EKPATKLPAE DRKGILTEVK 240 GLAIHQFSSV AVHATDSIII SAVPALGVAV VGAVSNYNLV INAVSAIVLI LFNSVVAGFG 300 NLAVTSTKER FEKVFEEANF ANFWIYGLCT VCFVVLLTPF VELWAGSDYA IDTASLVLII 360 FNFYLQGQST IYNNARIAKG NFNMDKWWSL LQAVINLVVS VAAAMRLGLV GVYIGTVVSR 420 LVFVVSRPSC TYRFLFGKSP SVYFRKLLIY FAAVVVATIT CRVACAPLLS SLGWHTLIAS 480 AVICLVVPNL IFFALFRGSL EFEALRVRVA SLLGVIR 517
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 6 | 517 | 1 | 507 | 0.8756 |
0.8996 |
| AF-Q8DPI1-F1-model_v4 | 6 | 516 | 1 | 490 | 0.8462 |
0.8879 |
| AF-Q2G262-F1-model_v4 | 6 | 514 | 1 | 476 | 0.8419 |
0.8926 |
| AF-H9L497-F1-model_v4 | 8 | 517 | 1 | 492 | 0.8397 |
0.8772 |
| AF-P77377-F1-model_v4 | 8 | 517 | 1 | 492 | 0.8349 |
0.8726 |
| AF-A0A0H3GSJ3-F1-model_v4 | 9 | 517 | 1 | 478 | 0.833 |
0.8828 |
| AF-Q2G0R7-F1-model_v4 | 4 | 517 | 1 | 505 | 0.8118 |
0.8438 |
| AF-Q9I1M8-F1-model_v4 | 12 | 507 | 1 | 469 | 0.8105 |
0.8678 |
| AF-Q23444-F1-model_v4 | 11 | 517 | 1 | 522 | 0.8031 |
0.8398 |
| AF-Q32ET1-F1-model_v4 | 11 | 512 | 1 | 510 | 0.7991 |
0.8383 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 5 | 514 | 1 | 509 | 0.8224 |
0.8532 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 515 | 28 | 544 | 0.7933 |
0.8359 |
| QNU38870.1 | GT4 | 11 | 517 | 1 | 477 | 0.7312 |
0.8631 |
| QJC17489.1 | GT2 | 1 | 515 | 120 | 842 | 0.6881 |
0.8643 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 3 | 517 | 1 | 596 | 0.6768 |
0.8504 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 8 | 517 | 1 | 596 | 0.659 |
0.8545 |
| AF-D1BIF1-F1-model_v4 | GT4 | 9 | 517 | 7 | 644 | 0.6586 |
0.8741 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 517 | 13 | 521 | 0.6505 |
0.8278 |
| AF-A1R6N5-F1-model_v4 | GT2 | 2 | 517 | 1 | 849 | 0.6483 |
0.8133 |
| A0A0C5BEZ8 | GT4 | 12 | 517 | 1 | 610 | 0.6463 |
0.8414 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 5 | 514 | 1 | 509 | 0.8224 |
0.8532 |
| A0A160T2N7 | GT28 | 1 | 515 | 28 | 544 | 0.7933 |
0.8359 |
| QNU38870.1 | GT4 | 11 | 517 | 1 | 477 | 0.7312 |
0.8631 |
| QJC17489.1 | GT2 | 1 | 515 | 120 | 842 | 0.6881 |
0.8643 |
| A0A3T0RPT8 | GT4 | 3 | 517 | 1 | 596 | 0.6768 |
0.8504 |
| A0A3Q9G719 | GT4 | 8 | 517 | 1 | 596 | 0.659 |
0.8545 |
| D1BIF1 | GT4 | 9 | 517 | 7 | 644 | 0.6586 |
0.8741 |
| F9ZKY1 | GT2 | 1 | 517 | 13 | 521 | 0.6505 |
0.8278 |
| A0A0C5BEZ8 | GT4 | 12 | 517 | 1 | 610 | 0.6463 |
0.8414 |
| A0A2U8PPB3 | GT4 | 14 | 517 | 1 | 828 | 0.6437 |
0.8209 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6nc6-assembly2.cif.gz_B | 15 | 507 | 1 | 461 | 0.7873 |
0.8494 |
| 7waw-assembly1.cif.gz_A | 19 | 509 | 1 | 496 | 0.7815 |
0.8258 |
| 7wag-assembly1.cif.gz_A | 15 | 512 | 4 | 510 | 0.7475 |
0.8012 |
| 6fhz-assembly1.cif.gz_A | 15 | 439 | 9 | 436 | 0.7414 |
0.8433 |
| 4mlb-assembly1.cif.gz_C | 2 | 436 | 1 | 447 | 0.6471 |
0.7355 |
| 5y50-assembly1.cif.gz_A | 8 | 436 | 5 | 433 | 0.64 |
0.7334 |
| 3wbn-assembly1.cif.gz_A | 2 | 436 | 1 | 445 | 0.6351 |
0.7219 |
| 6gwh-assembly1.cif.gz_A | 2 | 437 | 1 | 435 | 0.635 |
0.715 |
| 5xjj-assembly1.cif.gz_A | 8 | 436 | 6 | 434 | 0.6319 |
0.7251 |
| 6ids-assembly1.cif.gz_A | 8 | 436 | 6 | 428 | 0.6295 |
0.7235 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 6 | 517 | 1 | 507 | 0.8756 |
0.8996 |
| AF-P71060-F1-model_v4 | 11 | 517 | 1 | 501 | 0.8574 |
0.8914 |
| AF-Q48457-F1-model_v4 | 5 | 515 | 1 | 484 | 0.8449 |
0.891 |
| AF-D4GU68-F1-model_v4 | 10 | 517 | 1 | 472 | 0.8357 |
0.8898 |
| AF-P33699-F1-model_v4 | 3 | 517 | 1 | 488 | 0.8349 |
0.8816 |
| AF-P77377-F1-model_v4 | 8 | 517 | 1 | 492 | 0.8349 |
0.8726 |
| AF-D4GYG8-F1-model_v4 | 11 | 515 | 1 | 476 | 0.8294 |
0.8808 |
| AF-O32273-F1-model_v4 | 4 | 516 | 1 | 482 | 0.8216 |
0.8699 |
| AF-O34238-F1-model_v4 | 3 | 517 | 1 | 525 | 0.8214 |
0.8489 |
| AF-O83529-F1-model_v4 | 4 | 516 | 1 | 525 | 0.8166 |
0.8487 |