PROTEIN: HRGMv2_1578_16_28
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Protein File & Metadata
Source:
HRGMv2_1578_16_28.pdb
Genome ID:
Protein ID:
HRGMv2_1578_16_28
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Protein Sequence
MGYRILLMAP TFFGYRDRVR DELSRQGHSV VCVDDRPSES VSFRSFAKIS YRLVDGQIAK 60 YAESLKKKVA TGDYDLLIFM GGMSFCFTRD QFSSIRSSSN ARFVSYLWDA FNNCERFGAC 120 RDLFDDVYSF EPSDCERYDL KFRPLFFSGA YDGLPLVPDG GFTYDACFIG SVHQPSKFEA 180 VSSICDNLES QGLRVFRYFF MPSKSAALLR RLTNPAYRGV EFSFESLSTE KIVEIYARSK 240 AIVDSPQAGQ RGLTMRTLEA IGAHRKLITA NPDAALYDFA SKGDVAVWHG KGSVPPQFFT 300 TPYRVLPDEV YRGYSIETFV KALLGNEPAY EGYEKGNL 338
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27126-F1-model_v4 | 3 | 327 | 1 | 308 | 0.7631 |
0.8244 |
| AF-A0A133CNC9-F1-model_v4 | 1 | 338 | 1 | 298 | 0.7258 |
0.7946 |
| AF-Q5F734-F1-model_v4 | 1 | 327 | 2 | 354 | 0.7107 |
0.7736 |
| AF-Q5FAD9-F1-model_v4 | 3 | 327 | 1 | 352 | 0.7102 |
0.7772 |
| AF-G3XD85-F1-model_v4 | 2 | 327 | 1 | 363 | 0.6986 |
0.7796 |
| AF-K0EZX0-F1-model_v4 | 1 | 327 | 6 | 361 | 0.6937 |
0.7665 |
| AF-O07147-F1-model_v4 | 3 | 327 | 1 | 360 | 0.6931 |
0.7764 |
| AF-K0EX89-F1-model_v4 | 3 | 327 | 1 | 360 | 0.6923 |
0.7693 |
| AF-A0A1A7SPW8-F1-model_v4 | 1 | 327 | 3 | 374 | 0.6914 |
0.773 |
| AF-Q9HZ80-F1-model_v4 | 3 | 327 | 1 | 407 | 0.69 |
0.8038 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5J6T047-F1-model_v4 | GT4 | 1 | 332 | 16 | 352 | 0.7309 |
0.7819 |
| S7UZI9 | GT4 | 1 | 327 | 1 | 355 | 0.7283 |
0.8018 |
| AF-L8BAH0-F1-model_v4 | GT4 | 1 | 327 | 3 | 354 | 0.7278 |
0.8002 |
| AF-A0A2K9LCL5-F1-model_v4 | GT4 | 1 | 327 | 2 | 359 | 0.7268 |
0.8027 |
| AF-A0A127BA54-F1-model_v4 | GT4 | 3 | 333 | 1 | 374 | 0.726 |
0.8 |
| UTN04629.1 | GT0 | 1 | 328 | 3 | 334 | 0.7252 |
0.7712 |
| AF-A0A2S0QY31-F1-model_v4 | GT4 | 1 | 327 | 2 | 359 | 0.7252 |
0.8008 |
| AF-A5I6I2-F1-model_v4 | GT4 | 3 | 327 | 1 | 355 | 0.7247 |
0.803 |
| AF-A0A0E1KTQ9-F1-model_v4 | GT4 | 3 | 327 | 1 | 355 | 0.7241 |
0.8026 |
| A0A915XN81 | GT4 | 3 | 329 | 1 | 372 | 0.724 |
0.8112 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5J6T047 | GT4 | 1 | 332 | 16 | 352 | 0.7309 |
0.7819 |
| S7UZI9 | GT4 | 1 | 327 | 1 | 355 | 0.7283 |
0.8018 |
| WDY52650.1 | GT4 | 1 | 328 | 1 | 360 | 0.7282 |
0.7986 |
| A0A6H1W565 | GT4 | 1 | 327 | 3 | 361 | 0.7278 |
0.8071 |
| A0A127BA54 | GT4 | 3 | 333 | 1 | 374 | 0.726 |
0.8 |
| A0A915XN81 | GT4 | 3 | 329 | 1 | 372 | 0.724 |
0.8112 |
| A0A8I0HI30 | GT4 | 3 | 327 | 1 | 355 | 0.7238 |
0.802 |
| QOV30129.1 | GT4 | 1 | 326 | 1 | 354 | 0.7238 |
0.7893 |
| A0A0X8X468 | GT4 | 1 | 330 | 7 | 385 | 0.7233 |
0.8103 |
| A0A9E9HNP9 | GT4 | 3 | 327 | 1 | 364 | 0.7232 |
0.807 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5d01-assembly1.cif.gz_B | 1 | 327 | 1 | 356 | 0.7041 |
0.7709 |
| 5d00-assembly1.cif.gz_A | 1 | 327 | 1 | 356 | 0.7008 |
0.7681 |
| 5d01-assembly1.cif.gz_A | 1 | 327 | 1 | 353 | 0.6986 |
0.7625 |
| 6zj7-assembly1.cif.gz_AAA | 1 | 329 | 22 | 388 | 0.6887 |
0.7787 |
| 4n9w-assembly1.cif.gz_A | 2 | 327 | 1 | 347 | 0.6775 |
0.7476 |
| 6tvp-assembly1.cif.gz_A | 1 | 328 | 1 | 382 | 0.6751 |
0.7605 |
| 6tvp-assembly1.cif.gz_B | 1 | 328 | 1 | 385 | 0.6658 |
0.7513 |
| 3ot5-assembly5.cif.gz_A | 1 | 332 | 1 | 372 | 0.6364 |
0.7036 |
| 4nc9-assembly6.cif.gz_D | 2 | 327 | 1 | 346 | 0.6346 |
0.6973 |
| 3ot5-assembly6.cif.gz_D | 1 | 332 | 1 | 371 | 0.6323 |
0.6986 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27126-F1-model_v4 | 3 | 327 | 1 | 308 | 0.7631 |
0.8244 |
| AF-O07147-F1-model_v4 | 3 | 327 | 1 | 360 | 0.6931 |
0.7764 |
| AF-P9WMZ5-F1-model_v4 | 3 | 327 | 1 | 364 | 0.6879 |
0.7741 |
| AF-P9WMZ1-F1-model_v4 | 3 | 327 | 1 | 382 | 0.6833 |
0.7773 |
| AF-P9WMZ0-F1-model_v4 | 3 | 327 | 1 | 382 | 0.6828 |
0.7768 |
| AF-A0R2E2-F1-model_v4 | 3 | 327 | 1 | 382 | 0.6812 |
0.7749 |
| AF-A0QWG6-F1-model_v4 | 3 | 327 | 1 | 360 | 0.6795 |
0.7711 |
| AF-D4GU66-F1-model_v4 | 8 | 328 | 1 | 369 | 0.678 |
0.7674 |
| AF-P9WMY9-F1-model_v4 | 3 | 338 | 1 | 414 | 0.6728 |
0.7646 |
| AF-Q6DIQ1-F1-model_v4 | 3 | 326 | 1 | 335 | 0.6675 |
0.7263 |