PROTEIN: HRGMv2_1552_22_5
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Protein File & Metadata
Source:
HRGMv2_1552_22_5.pdb
Genome ID:
Protein ID:
HRGMv2_1552_22_5
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Protein Sequence
MTRLNYEHNG SKKLDSKMSL LSYRVSDFIL FNIFFLLAFQ NAFQKLFGGA FAYIDEFSAL 60 LLCCWAVFSM HGHKTRYCMI SRYLLLINSL LLLLLGLCGN LLYKLQPAYQ AIAIDAFACS 120 KFIISLISSV VILQKRSVIE LASSFAKFIL PLLLILYFLN QFIDLGLSSG ERLGYSFLFG 180 HPTNFAATVV CLISILLLDV KSNRLFIVCG LLVLCATGRF KAIGFAFIIA AAVFLYSNKK 240 KIPLSFILLA GCGALFLVYD QISLYFFDST TARSVLLSTS FDVANMHWPL GSGLATYGSN 300 ASADYYSSFY YSLGFPSVYG LGPMNHDYLV DSFWPAVIGQ CGYIGLLLVA IIFVLLFSMS 360 RKAVDHGVPL WASFAIPIYL LIASTSEASI FSSYSVLLAM TFAMLTADSN PFHVGESDE 419
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 20 | 419 | 2 | 439 | 0.5878 |
0.7615 |
| AF-M1FGR5-F1-model_v4 | GT2 | 21 | 419 | 4 | 509 | 0.586 |
0.7628 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 20 | 419 | 2 | 439 | 0.5859 |
0.759 |
| AF-E4PMS8-F1-model_v4 | GT2 | 20 | 419 | 2 | 505 | 0.5818 |
0.7538 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 20 | 419 | 2 | 507 | 0.5801 |
0.7501 |
| AF-A0A346S464-F1-model_v4 | GT2 | 20 | 419 | 2 | 508 | 0.5783 |
0.7497 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 20 | 419 | 5 | 510 | 0.5757 |
0.7461 |
| QSP96058.1 | GT2 | 21 | 419 | 9 | 514 | 0.5712 |
0.7441 |
| WBY01952.1 | GT9 | 11 | 419 | 3 | 560 | 0.5524 |
0.7361 |
| AF-A0A2P1NHY6-F1-model_v4 | GT4 | 12 | 419 | 13 | 448 | 0.5406 |
0.7415 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 21 | 419 | 9 | 514 | 0.5712 |
0.7441 |
| A0A517MXC4 | GT26 | 21 | 419 | 19 | 452 | 0.5557 |
0.7503 |
| WBY01952.1 | GT9 | 11 | 419 | 3 | 560 | 0.5524 |
0.7361 |
| A0A2P1NHY6 | GT4 | 12 | 419 | 13 | 448 | 0.5406 |
0.7415 |
| B5YD26 | GT9 | 23 | 419 | 42 | 478 | 0.538 |
0.7403 |
| D5MJ04 | GT9 | 23 | 419 | 26 | 560 | 0.5338 |
0.7324 |
| UII34295.1 | GT4 | 21 | 419 | 14 | 782 | 0.5153 |
0.7061 |
| B8IGI7 | GH16_7 | 23 | 419 | 19 | 462 | 0.5039 |
0.7099 |
| A0A5B7R2V6 | GH5_39 | 23 | 415 | 383 | 793 | 0.4826 |
0.6785 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.