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PROTEIN: HRGMv2_1548_4_10

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Protein File & Metadata
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Source:
HRGMv2_1548_4_10.pdb
Genome ID:
HRGMv2_1548
Protein ID:
HRGMv2_1548_4_10

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDFEMSR   RGFASVLVTG   ALSLALAGCG   GGAAGAGSAA   GSAAGSAAGS   SAAESVEVHV 60
ASLKGPTSIG   LVQFMDQAAN   GETDNEFDFA   INTAADEIVP   KVIQGDIDIA   LVPANVASVL 120
YNKTEGAVQV   IDINTLGVLN   VVTGDASVAS   FGDLAGHTVY   MTGKGTTPEY   VMNYLLERAG 180
LTGQVTLEFK   SEPTEVLSAL   LADPSAVGVL   PEPFKTAAIA   KSEGKLSAPV   SLTDVWDELA 240
GDTGSRLLTG   VTVVRRAFAE   EHPDAVAEFL   SCHAASVKAV   NAAPADWAQA   VVDAGIVDNA 300
KIAEKAIPGC   MLVCQTGKDM   KAALSGYLQV   LFDADASAVG   GKLPADDFYY   LE 352
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 54 351 28 325 0.7464 0.8611
AF-A0A0H3GP99-F1-model_v4 34 352 8 318 0.7162 0.7993
AF-Q9I0P2-F1-model_v4 26 352 12 306 0.714 0.8255
AF-A0A0H3GZA9-F1-model_v4 25 352 17 310 0.7129 0.8285
AF-A0A0D2GYL1-F1-model_v4 55 352 1 295 0.7022 0.8041
AF-U7PRE8-F1-model_v4 26 352 5 321 0.6933 0.764
AF-A0A0H3GR32-F1-model_v4 52 352 46 344 0.6872 0.8138
AF-U7Q5Y8-F1-model_v4 49 352 1 313 0.6857 0.7856
AF-U7PXF6-F1-model_v4 55 352 1 294 0.6816 0.8061
AF-Q9I0N8-F1-model_v4 54 352 25 310 0.6795 0.8038
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A975KCS4 GH23 27 303 23 339 0.4265 0.6146
AF-E1WT20-F1-model_v4 GH23 52 302 37 443 0.4257 0.6584
AF-A0A0K6BW89-F1-model_v4 GH23 54 302 39 442 0.4238 0.6599
AF-A0A0P0GMK8-F1-model_v4 GH23 53 302 38 442 0.4232 0.656
AF-A0A0K2J3V1-F1-model_v4 GH23 51 303 60 365 0.4192 0.6638
AF-L0RFS4-F1-model_v4 GH23 48 305 24 451 0.4181 0.6373
AF-C6BRT1-F1-model_v4 GH23 48 305 42 474 0.4163 0.6424
AF-A0A3T0VQB1-F1-model_v4 GH23 53 305 46 466 0.3946 0.6249
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A975KCS4 GH23 27 303 23 339 0.4265 0.6146
C6BRT1 GH23 48 305 42 474 0.4163 0.6424
E1YCM4 GH23 53 305 37 450 0.4149 0.6377
F3Z2E8 GH23 13 305 34 459 0.4102 0.5667
A0A6I6K4Y9 GH23 21 300 38 299 0.4086 0.614
A0A1Y3Y3U2 GH23 54 300 37 282 0.4059 0.6365
A0A6C0GKB0 GH23 12 300 50 310 0.4019 0.6085
A0A3T0VQB1 GH23 53 305 46 466 0.3946 0.6249
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 55 352 1 279 0.7881 0.8952
2x26-assembly2.cif.gz_B 54 351 1 286 0.7321 0.835
2x26-assembly1.cif.gz_A 54 352 1 287 0.714 0.8336
3un6-assembly1.cif.gz_A 55 352 1 283 0.682 0.7875
3uif-assembly1.cif.gz_A 54 352 3 307 0.6754 0.7862
7ahr-assembly1.cif.gz_A 18 352 1 280 0.6651 0.7681
3ksx-assembly1.cif.gz_A 53 352 1 289 0.6647 0.754
7an6-assembly1.cif.gz_B 17 352 1 282 0.6588 0.7558
7an8-assembly1.cif.gz_B 16 352 1 282 0.655 0.7509
6st1-assembly2.cif.gz_B 57 352 1 295 0.6535 0.7379
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 53 352 28 325 0.6906 0.8088
AF-A9WGD2-F1-model_v4 53 352 42 344 0.6758 0.8039
AF-P75853-F1-model_v4 37 352 7 311 0.6729 0.7611
AF-Q9KXN1-F1-model_v4 54 351 1 282 0.6721 0.7698
AF-Q8FUN4-F1-model_v4 25 352 14 317 0.6445 0.73
AF-Q5SI12-F1-model_v4 56 350 1 272 0.6445 0.7497
AF-Q47537-F1-model_v4 26 352 10 317 0.6413 0.721
AF-Q576E1-F1-model_v4 27 352 14 317 0.6394 0.7249
AF-Q2YJB6-F1-model_v4 26 352 13 317 0.6383 0.7222
AF-Q5ZV75-F1-model_v4 54 352 5 297 0.6369 0.7441
Download Full SwissProt Results